Gene : evm_27.TU.AmTr_v1.0_scaffold00056.153 A. trichopoda v1.0
Defline:  (1 of 1) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase Genomic Order:  148
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00056.153 Secondary Identifier:  ? PAC:31568327
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda TRNA-CHARGING-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00056.153 0.5kb upstream 0.5kb upstream 13208 true AmTr_v1.0_scaffold00056: 2837808-2851015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00056: 2850516-2851015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 0.5kb downstream 0.5kb downstream 13208 true AmTr_v1.0_scaffold00056: 2837308-2850515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00056: 2837308-2837807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 1.0kb upstream 1.0kb upstream 13708 true AmTr_v1.0_scaffold00056: 2837808-2851515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00056: 2850516-2851515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 1.0kb downstream 1.0kb downstream 13708 true AmTr_v1.0_scaffold00056: 2836808-2850515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00056: 2836808-2837807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 2.0kb upstream 2.0kb upstream 14708 true AmTr_v1.0_scaffold00056: 2837808-2852515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00056: 2850516-2852515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 2.0kb downstream 2.0kb downstream 14708 true AmTr_v1.0_scaffold00056: 2835808-2850515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00056: 2835808-2837807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 5.0kb upstream 5.0kb upstream 17708 true AmTr_v1.0_scaffold00056: 2837808-2855515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00056: 2850516-2855515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 5.0kb downstream 5.0kb downstream 17708 true AmTr_v1.0_scaffold00056: 2832808-2850515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00056: 2832808-2837807 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 10.0kb upstream 10.0kb upstream 22708 true AmTr_v1.0_scaffold00056: 2837808-2860515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00056: 2850516-2860515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 10.0kb downstream 10.0kb downstream 22708 true AmTr_v1.0_scaffold00056: 2827808-2850515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00056.153 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00056: 2827808-2837807 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042876 5273 Angiosperm View MSA
121345157 5274 Embryophyte View MSA
123426289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain