Protein : evm_27.model.AmTr_v1.0_scaffold00038.82 A. trichopoda v1.0
UniProt Accession:  ? U5CZN6 Secondary Identifier:  PAC:31570872
Organism Name:  Amborella trichopoda Length:  1850  
Name:  evm_27.model.AmTr_v1.0_scaffold00038.82
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SummaryProteinsOther
 

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Proteins

11 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR022967 Domain RNA-binding domain, S1
IPR028083 Domain Spt6 acidic, N-terminal domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
evm_27.model.AmTr_v1.0_scaffold00038.82_CDS 5553   AmTr_v1.0_scaffold00038: 1926801-1942922 Amborella trichopoda

33 Ontology Annotations

Ontology Term Db Gene/Protein Name
U5CZN6 UniProt evm_27.model.AmTr_v1.0_scaffold00038.82
PF14632 PFAM evm_27.model.AmTr_v1.0_scaffold00038.82
PF14633 PFAM evm_27.model.AmTr_v1.0_scaffold00038.82
PTHR10145 PANTHER evm_27.model.AmTr_v1.0_scaffold00038.82
PTHR10145:SF6 PANTHER evm_27.model.AmTr_v1.0_scaffold00038.82
PF14641 PFAM evm_27.model.AmTr_v1.0_scaffold00038.82
PF14878 PFAM evm_27.model.AmTr_v1.0_scaffold00038.82
PF14635 PFAM evm_27.model.AmTr_v1.0_scaffold00038.82
PF14639 PFAM evm_27.model.AmTr_v1.0_scaffold00038.82
SSF158832 SSF evm_27.model.AmTr_v1.0_scaffold00038.82
SSF47781 SSF evm_27.model.AmTr_v1.0_scaffold00038.82
PS50126 PROFILE evm_27.model.AmTr_v1.0_scaffold00038.82
SM00316 SMART evm_27.model.AmTr_v1.0_scaffold00038.82
SSF55550 SSF evm_27.model.AmTr_v1.0_scaffold00038.82
SSF50249 SSF evm_27.model.AmTr_v1.0_scaffold00038.82
SSF53098 SSF evm_27.model.AmTr_v1.0_scaffold00038.82
IPR012337 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
IPR012340 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
IPR003029 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
IPR010994 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
IPR022967 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
IPR017072 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
IPR028083 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
IPR027999 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
IPR028231 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
K11292 KEGG evm_27.model.AmTr_v1.0_scaffold00038.82
IPR028088 InterPro evm_27.model.AmTr_v1.0_scaffold00038.82
GO:0003676 GO evm_27.model.AmTr_v1.0_scaffold00038.82
GO:0003677 GO evm_27.model.AmTr_v1.0_scaffold00038.82
GO:0032784 GO evm_27.model.AmTr_v1.0_scaffold00038.82

0 Pathway Components

0 Pathways