Gene : evm_27.TU.AmTr_v1.0_scaffold00017.182 A. trichopoda v1.0
Defline:  (1 of 2) PTHR31235:SF77 - PEROXIDASE 12 Genomic Order:  181
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00017.182 Secondary Identifier:  ? PAC:31570102
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5466 Amborella trichopoda pathologic  
Atrichopoda PWY-7214 Amborella trichopoda pathologic  
Atrichopoda PWY-7445 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00017.182 0.5kb upstream 0.5kb upstream 4592 true AmTr_v1.0_scaffold00017: 4942756-4947347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00017: 4942756-4943255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 0.5kb downstream 0.5kb downstream 4592 true AmTr_v1.0_scaffold00017: 4943256-4947847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00017: 4947348-4947847 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 1.0kb upstream 1.0kb upstream 5092 true AmTr_v1.0_scaffold00017: 4942256-4947347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00017: 4942256-4943255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 1.0kb downstream 1.0kb downstream 5092 true AmTr_v1.0_scaffold00017: 4943256-4948347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00017: 4947348-4948347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 2.0kb upstream 2.0kb upstream 6092 true AmTr_v1.0_scaffold00017: 4941256-4947347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00017: 4941256-4943255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 2.0kb downstream 2.0kb downstream 6092 true AmTr_v1.0_scaffold00017: 4943256-4949347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00017: 4947348-4949347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 5.0kb upstream 5.0kb upstream 9092 true AmTr_v1.0_scaffold00017: 4938256-4947347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00017: 4938256-4943255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 5.0kb downstream 5.0kb downstream 9092 true AmTr_v1.0_scaffold00017: 4943256-4952347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00017: 4947348-4952347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 10.0kb upstream 10.0kb upstream 14092 true AmTr_v1.0_scaffold00017: 4933256-4947347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00017: 4933256-4943255 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 10.0kb downstream 10.0kb downstream 14092 true AmTr_v1.0_scaffold00017: 4943256-4957347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00017.182 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00017: 4947348-4957347 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047020 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain