Gene : evm_27.TU.AmTr_v1.0_scaffold00007.362 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10791//PTHR10791:SF23 - RAG1-ACTIVATING PROTEIN 1 Genomic Order:  357
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00007.362 Secondary Identifier:  ? PAC:31557918
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00007.362 0.5kb upstream 0.5kb upstream 3280 true AmTr_v1.0_scaffold00007: 8576848-8580127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00007: 8576848-8577347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 0.5kb downstream 0.5kb downstream 3280 true AmTr_v1.0_scaffold00007: 8577348-8580627 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00007: 8580128-8580627 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 1.0kb upstream 1.0kb upstream 3780 true AmTr_v1.0_scaffold00007: 8576348-8580127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00007: 8576348-8577347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 1.0kb downstream 1.0kb downstream 3780 true AmTr_v1.0_scaffold00007: 8577348-8581127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00007: 8580128-8581127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 2.0kb upstream 2.0kb upstream 4780 true AmTr_v1.0_scaffold00007: 8575348-8580127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00007: 8575348-8577347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 2.0kb downstream 2.0kb downstream 4780 true AmTr_v1.0_scaffold00007: 8577348-8582127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00007: 8580128-8582127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 5.0kb upstream 5.0kb upstream 7780 true AmTr_v1.0_scaffold00007: 8572348-8580127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00007: 8572348-8577347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 5.0kb downstream 5.0kb downstream 7780 true AmTr_v1.0_scaffold00007: 8577348-8585127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00007: 8580128-8585127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 10.0kb upstream 10.0kb upstream 12780 true AmTr_v1.0_scaffold00007: 8567348-8580127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00007: 8567348-8577347 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 10.0kb downstream 10.0kb downstream 12780 true AmTr_v1.0_scaffold00007: 8577348-8590127 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00007.362 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00007: 8580128-8590127 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain