Gene : evm_27.TU.AmTr_v1.0_scaffold00004.216 A. trichopoda v1.0
Defline:  (1 of 1) PTHR13270 - PROTEIN C20ORF116-RELATED Genomic Order:  216
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.216 Secondary Identifier:  ? PAC:31550322
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.216 0.5kb upstream 0.5kb upstream 28337 true AmTr_v1.0_scaffold00004: 4466089-4494425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 4493926-4494425 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 0.5kb downstream 0.5kb downstream 28337 true AmTr_v1.0_scaffold00004: 4465589-4493925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 4465589-4466088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 1.0kb upstream 1.0kb upstream 28837 true AmTr_v1.0_scaffold00004: 4466089-4494925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 4493926-4494925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 1.0kb downstream 1.0kb downstream 28837 true AmTr_v1.0_scaffold00004: 4465089-4493925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 4465089-4466088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 2.0kb upstream 2.0kb upstream 29837 true AmTr_v1.0_scaffold00004: 4466089-4495925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 4493926-4495925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 2.0kb downstream 2.0kb downstream 29837 true AmTr_v1.0_scaffold00004: 4464089-4493925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 4464089-4466088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 5.0kb upstream 5.0kb upstream 32837 true AmTr_v1.0_scaffold00004: 4466089-4498925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 4493926-4498925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 5.0kb downstream 5.0kb downstream 32837 true AmTr_v1.0_scaffold00004: 4461089-4493925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 4461089-4466088 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 10.0kb upstream 10.0kb upstream 37837 true AmTr_v1.0_scaffold00004: 4466089-4503925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 4493926-4503925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 10.0kb downstream 10.0kb downstream 37837 true AmTr_v1.0_scaffold00004: 4456089-4493925 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.216 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 4456089-4466088 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042845 5273 Angiosperm View MSA
121345530 5274 Embryophyte View MSA
123425622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain