Gene : evm_27.TU.AmTr_v1.0_scaffold00004.241 A. trichopoda v1.0
Defline:  (1 of 3) 4.1.3.1 - Isocitrate lyase / Isocitritase Genomic Order:  240
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00004.241 Secondary Identifier:  ? PAC:31550428
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLYOXYLATE-BYPASS Amborella trichopoda pathologic  
Atrichopoda PWY-561 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00004.241 0.5kb upstream 0.5kb upstream 2703 true AmTr_v1.0_scaffold00004: 6105763-6108465 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00004: 6107966-6108465 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 0.5kb downstream 0.5kb downstream 2703 true AmTr_v1.0_scaffold00004: 6105263-6107965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00004: 6105263-6105762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 1.0kb upstream 1.0kb upstream 3203 true AmTr_v1.0_scaffold00004: 6105763-6108965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00004: 6107966-6108965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 1.0kb downstream 1.0kb downstream 3203 true AmTr_v1.0_scaffold00004: 6104763-6107965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00004: 6104763-6105762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 2.0kb upstream 2.0kb upstream 4203 true AmTr_v1.0_scaffold00004: 6105763-6109965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00004: 6107966-6109965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 2.0kb downstream 2.0kb downstream 4203 true AmTr_v1.0_scaffold00004: 6103763-6107965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00004: 6103763-6105762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 5.0kb upstream 5.0kb upstream 7203 true AmTr_v1.0_scaffold00004: 6105763-6112965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00004: 6107966-6112965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 5.0kb downstream 5.0kb downstream 7203 true AmTr_v1.0_scaffold00004: 6100763-6107965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00004: 6100763-6105762 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 10.0kb upstream 10.0kb upstream 12203 true AmTr_v1.0_scaffold00004: 6105763-6117965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00004: 6107966-6117965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 10.0kb downstream 10.0kb downstream 12203 true AmTr_v1.0_scaffold00004: 6095763-6107965 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00004.241 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00004: 6095763-6105762 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049985 5273 Angiosperm View MSA
121347561 5274 Embryophyte View MSA
123428552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain