GO Term : GO:0072588 box H/ACA RNP complex GO

Namespace:  cellular_component Obsolete:  false
description  A ribonucleoprotein complex that contains an RNA of the box H/ACA type and the four core proteins dyskerin, NOP10, NHP2, and GAR1 (human protein nomenclature). RNA pseudouridylation (isomerization of uridine to pseudouridine) is the major, and most likely the ancestral, function of H/ACA RNPs. Pseudouridylation targets include both large and small ribosomal RNAs (rRNAs), and small nuclear RNA (U2 snRNA). In addition to these catalytic H/ACA RNPs, a less abundant but more diverse class of structural H/ACA RNPs exists, which does not have pseudouridylation activity. These include the vertebrate telomerase RNP complex.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

792 Ontology Annotations

Class GO Term Gene Name Db
GOAnnotation GO:0072588 229746  
OntologyAnnotation GO:0072588 229746 GO
OntologyAnnotation GO:0072588 28492.m000485 GO
GOAnnotation GO:0072588 28492.t000023  
GOAnnotation GO:0072588 Cucsa.171640  
OntologyAnnotation GO:0072588 Cucsa.171640.1 GO
OntologyAnnotation GO:0072588 AT2G20490.2 GO
OntologyAnnotation GO:0072588 AT2G20490.1 GO
GOAnnotation GO:0072588 AT2G20490  
OntologyAnnotation GO:0072588 Thhalv10002149m GO
GOAnnotation GO:0072588 Thhalv10002146m.g  
OntologyAnnotation GO:0072588 Thhalv10002146m GO
OntologyAnnotation GO:0072588 Thhalv10002145m GO
OntologyAnnotation GO:0072588 Thhalv10002147m GO
OntologyAnnotation GO:0072588 Ciclev10023246m GO
GOAnnotation GO:0072588 Ciclev10023246m.g  
GOAnnotation GO:0072588 Lus10033907.g  
OntologyAnnotation GO:0072588 Lus10033907 GO
OntologyAnnotation GO:0072588 Lus10024913 GO
GOAnnotation GO:0072588 Lus10024913.g  
OntologyAnnotation GO:0072588 Lus10022910 GO
GOAnnotation GO:0072588 Lus10022910.g  
GOAnnotation GO:0072588 Potri.002G036500  
OntologyAnnotation GO:0072588 Potri.002G036500.1 GO
OntologyAnnotation GO:0072588 Potri.002G036500.4 GO
OntologyAnnotation GO:0072588 Potri.002G036500.3 GO
OntologyAnnotation GO:0072588 Potri.002G036500.2 GO
OntologyAnnotation GO:0072588 Potri.005G226300.1 GO
GOAnnotation GO:0072588 Potri.005G226300  
OntologyAnnotation GO:0072588 Potri.005G226300.2 GO

19 Parents

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0043231 intracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0005732 small nucleolar ribonucleoprotein complex A ribonucleoprotein complex that contains an RNA molecule of the small nucleolar RNA (snoRNA) family and associated proteins. Most are involved in a step of processing of rRNA: cleavage, 2'-O-methylation, or pseudouridylation. The majority, though not all, fall into one of two classes, box C/D type or box H/ACA type.
GO:0030529 intracellular ribonucleoprotein complex An intracellular macromolecular complex containing both protein and RNA molecules.
GO:0072588 box H/ACA RNP complex A ribonucleoprotein complex that contains an RNA of the box H/ACA type and the four core proteins dyskerin, NOP10, NHP2, and GAR1 (human protein nomenclature). RNA pseudouridylation (isomerization of uridine to pseudouridine) is the major, and most likely the ancestral, function of H/ACA RNPs. Pseudouridylation targets include both large and small ribosomal RNAs (rRNAs), and small nuclear RNA (U2 snRNA). In addition to these catalytic H/ACA RNPs, a less abundant but more diverse class of structural H/ACA RNPs exists, which does not have pseudouridylation activity. These include the vertebrate telomerase RNP complex.
GO:1990904 ribonucleoprotein complex A macromolecular complex containing both protein and RNA molecules.
GO:0044464 cell part Any constituent part of a cell, the basic structural and functional unit of all organisms.
GO:0044424 intracellular part Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0032991 macromolecular complex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together.
GO:0005575 cellular_component The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
GO:0005623 cell The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
GO:0044428 nuclear part Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated.
GO:0043227 membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0044422 organelle part Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
GO:0044446 intracellular organelle part A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
GO:0005697 telomerase holoenzyme complex Telomerase is a ribonucleoprotein enzyme complex, with a minimal catalytic core composed of a catalytic reverse transcriptase subunit and an RNA subunit that provides the template for telomeric DNA addition. In vivo, the holoenzyme complex often contains additional subunits.

30 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0072588 GO:0031429
is_a GO:0044428 GO:0072588
is_a GO:0005732 GO:0072588
part of GO:0005697 GO:0072588
is_a GO:0030529 GO:0072588
part of GO:0044428 GO:0072588
part of GO:0005623 GO:0072588
part of GO:0005622 GO:0072588
part of GO:0030529 GO:0072588
part of GO:0044464 GO:0072588
part of GO:0043231 GO:0072588
part of GO:0044422 GO:0072588
part of GO:0044424 GO:0072588
part of GO:0044446 GO:0072588
part of GO:1990904 GO:0072588
is_a GO:0032991 GO:0072588
part of GO:0032991 GO:0072588
part of GO:0005575 GO:0072588
part of GO:0043226 GO:0072588
is_a GO:0044424 GO:0072588
is_a GO:0044446 GO:0072588
is_a GO:0005575 GO:0072588
part of GO:0043227 GO:0072588
part of GO:0005634 GO:0072588
part of GO:0043229 GO:0072588
is_a GO:0044464 GO:0072588
is_a GO:0044422 GO:0072588
is_a GO:1990904 GO:0072588
is_a GO:0072588 GO:0072589
is_a GO:0072588 GO:0090661

2 Synonyms

Name Type
box H/ACA snoRNP pseudouridylase complex synonym
sRNP complex synonym