GO Term : GO:0019988 charged-tRNA amino acid modification GO

Namespace:  biological_process Obsolete:  false
description  The covalent alteration of an amino acid charged on a tRNA before it is incorporated into a protein, as in N-formylmethionine, selenocysteine or pyrrolysine.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

10158 Ontology Annotations

Class GO Term Gene Name Db
GOAnnotation GO:0019988 90248  
OntologyAnnotation GO:0019988 90248 GO
OntologyAnnotation GO:0019988 evm.TU.contig_44357.1 GO
GOAnnotation GO:0019988 evm.TU.contig_44357  
OntologyAnnotation GO:0019988 evm.model.supercontig_40.100 GO
GOAnnotation GO:0019988 evm.TU.supercontig_40.100  
GOAnnotation GO:0019988 29912.t000154  
OntologyAnnotation GO:0019988 29912.m005428 GO
GOAnnotation GO:0019988 Cucsa.116630  
OntologyAnnotation GO:0019988 Cucsa.116630.1 GO
OntologyAnnotation GO:0019988 Cucsa.116630.2 GO
OntologyAnnotation GO:0019988 Cucsa.116630.3 GO
OntologyAnnotation GO:0019988 orange1.1g012407m GO
GOAnnotation GO:0019988 orange1.1g012407m.g  
OntologyAnnotation GO:0019988 orange1.1g016741m GO
OntologyAnnotation GO:0019988 orange1.1g016571m GO
OntologyAnnotation GO:0019988 AT2G40570.1 GO
GOAnnotation GO:0019988 AT2G40570  
OntologyAnnotation GO:0019988 AT2G40570.2 GO
GOAnnotation GO:0019988 Thhalv10016464m.g  
OntologyAnnotation GO:0019988 Thhalv10016464m GO
OntologyAnnotation GO:0019988 Ciclev10008601m GO
GOAnnotation GO:0019988 Ciclev10008594m.g  
OntologyAnnotation GO:0019988 Ciclev10008594m GO
GOAnnotation GO:0019988 Ciclev10010851m.g  
OntologyAnnotation GO:0019988 Ciclev10010851m GO
OntologyAnnotation GO:0019988 Lus10012958 GO
GOAnnotation GO:0019988 Lus10012958.g  
OntologyAnnotation GO:0019988 Potri.018G087300.2 GO
OntologyAnnotation GO:0019988 Potri.018G087300.3 GO

30 Parents

Identifier Name Description
GO:0006400 tRNA modification The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0006396 RNA processing Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0009451 RNA modification The covalent alteration of one or more nucleotides within an RNA molecule to produce an RNA molecule with a sequence that differs from that coded genetically.
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO:0019538 protein metabolic process The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.
GO:0006139 nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
GO:0008033 tRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
GO:0006464 cellular protein modification process The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0019988 charged-tRNA amino acid modification The covalent alteration of an amino acid charged on a tRNA before it is incorporated into a protein, as in N-formylmethionine, selenocysteine or pyrrolysine.
GO:0043412 macromolecule modification The covalent alteration of one or more monomeric units in a polypeptide, polynucleotide, polysaccharide, or other biological macromolecule, resulting in a change in its properties.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0006725 cellular aromatic compound metabolic process The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.
GO:0016070 RNA metabolic process The cellular chemical reactions and pathways involving RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.
GO:0044260 cellular macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass, as carried out by individual cells.
GO:0044267 cellular protein metabolic process The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0090304 nucleic acid metabolic process Any cellular metabolic process involving nucleic acids.
GO:0034641 cellular nitrogen compound metabolic process The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.
GO:1901360 organic cyclic compound metabolic process The chemical reactions and pathways involving organic cyclic compound.
GO:0046483 heterocycle metabolic process The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).
GO:0043170 macromolecule metabolic process The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
GO:0036211 protein modification process The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO:0010467 gene expression The process in which a gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA (for protein-coding genes) and the translation of that mRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
GO:0034470 ncRNA processing Any process that results in the conversion of one or more primary non-coding RNA (ncRNA) transcripts into one or more mature ncRNA molecules.
GO:0034660 ncRNA metabolic process The chemical reactions and pathways involving non-coding RNA transcripts (ncRNAs).
GO:0006399 tRNA metabolic process The chemical reactions and pathways involving tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis. Transfer RNA is characterized by the presence of many unusual minor bases, the function of which has not been completely established.

41 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0019988 GO:0001717
is_a GO:0019988 GO:0001720
part of GO:0019988 GO:0004479
is_a GO:0006464 GO:0019988
is_a GO:0006400 GO:0019988
is_a GO:0009451 GO:0019988
is_a GO:0043170 GO:0019988
is_a GO:0044260 GO:0019988
is_a GO:1901360 GO:0019988
is_a GO:0046483 GO:0019988
is_a GO:0043412 GO:0019988
is_a GO:0019538 GO:0019988
is_a GO:0071704 GO:0019988
is_a GO:0044267 GO:0019988
is_a GO:0090304 GO:0019988
is_a GO:0036211 GO:0019988
is_a GO:0006807 GO:0019988
part of GO:0043170 GO:0019988
is_a GO:0006725 GO:0019988
is_a GO:0034470 GO:0019988
part of GO:0071704 GO:0019988
is_a GO:0006139 GO:0019988
is_a GO:0009987 GO:0019988
part of GO:0008150 GO:0019988
is_a GO:0006399 GO:0019988
part of GO:0008152 GO:0019988
is_a GO:0008033 GO:0019988
is_a GO:0006396 GO:0019988
is_a GO:0008150 GO:0019988
is_a GO:0008152 GO:0019988

8 Synonyms

Name Type
pre-translational amino acid modification synonym
pre-translational protein modification synonym
charged tRNA modification synonym
charged-tRNA modification synonym
GO:0030630 alt_id
pretranslation protein modification synonym
pretranslational amino acid modification synonym
charged tRNA amino acid modification synonym