GO Term : GO:0016602 CCAAT-binding factor complex GO

Namespace:  cellular_component Obsolete:  false
description  A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; functions as both an activator and a repressor, depending on its interacting cofactors. Typically trimeric consisting of NFYA, NFYB and NFYC subunits. In Saccharomyces, it activates the transcription of genes in response to growth in a nonfermentable carbon source and consists of four known subunits: HAP2, HAP3, HAP4 and HAP5.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

330 Ontology Annotations

Class GO Term Gene Name Db
OntologyAnnotation GO:0016602 77573 GO
GOAnnotation GO:0016602 77573  
OntologyAnnotation GO:0016602 orange1.1g045847m GO
GOAnnotation GO:0016602 orange1.1g045847m.g  
GOAnnotation GO:0016602 AT5G38140  
OntologyAnnotation GO:0016602 AT5G38140.1 GO
OntologyAnnotation GO:0016602 AT5G50470.1 GO
GOAnnotation GO:0016602 AT5G50470  
GOAnnotation GO:0016602 Thhalv10028056m.g  
OntologyAnnotation GO:0016602 Thhalv10028056m GO
OntologyAnnotation GO:0016602 Thhalv10028081m GO
GOAnnotation GO:0016602 Thhalv10028081m.g  
GOAnnotation GO:0016602 Ciclev10013435m.g  
OntologyAnnotation GO:0016602 Ciclev10013435m GO
GOAnnotation GO:0016602 Gorai.008G057500  
OntologyAnnotation GO:0016602 Gorai.008G057500.3 GO
GOAnnotation GO:0016602 estExt_Genemark1.C_120335  
OntologyAnnotation GO:0016602 66996 GO
GOAnnotation GO:0016602 gwEuk.11.390.1  
OntologyAnnotation GO:0016602 7962 GO
OntologyAnnotation GO:0016602 Thecc1EG019356t4 GO
OntologyAnnotation GO:0016602 Thecc1EG019356t2 GO
GOAnnotation GO:0016602 Thecc1EG019356  
OntologyAnnotation GO:0016602 Thecc1EG019356t1 GO
OntologyAnnotation GO:0016602 Thecc1EG019356t5 GO
OntologyAnnotation GO:0016602 Thecc1EG019356t6 GO
OntologyAnnotation GO:0016602 Thecc1EG019356t3 GO
OntologyAnnotation GO:0016602 Araha.14384s0001.1.p GO
GOAnnotation GO:0016602 Araha.14384s0001  
GOAnnotation GO:0016602 Araha.47453s0001  

19 Parents

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0043234 protein complex A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0043231 intracellular membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane and occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0016602 CCAAT-binding factor complex A heteromeric transcription factor complex that binds to the CCAAT-box upstream of promoters; functions as both an activator and a repressor, depending on its interacting cofactors. Typically trimeric consisting of NFYA, NFYB and NFYC subunits. In Saccharomyces, it activates the transcription of genes in response to growth in a nonfermentable carbon source and consists of four known subunits: HAP2, HAP3, HAP4 and HAP5.
GO:0005667 transcription factor complex A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.
GO:0044464 cell part Any constituent part of a cell, the basic structural and functional unit of all organisms.
GO:0044424 intracellular part Any constituent part of the living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0032991 macromolecular complex A stable assembly of two or more macromolecules, i.e. proteins, nucleic acids, carbohydrates or lipids, in which the constituent parts function together.
GO:0005575 cellular_component The part of a cell or its extracellular environment in which a gene product is located. A gene product may be located in one or more parts of a cell and its location may be as specific as a particular macromolecular complex, that is, a stable, persistent association of macromolecules that function together.
GO:0005623 cell The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.
GO:0044428 nuclear part Any constituent part of the nucleus, a membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated.
GO:0043227 membrane-bounded organelle Organized structure of distinctive morphology and function, bounded by a single or double lipid bilayer membrane. Includes the nucleus, mitochondria, plastids, vacuoles, and vesicles. Excludes the plasma membrane.
GO:0043226 organelle Organized structure of distinctive morphology and function. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, and prokaryotic structures such as anammoxosomes and pirellulosomes. Excludes the plasma membrane.
GO:0043229 intracellular organelle Organized structure of distinctive morphology and function, occurring within the cell. Includes the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton. Excludes the plasma membrane.
GO:0044422 organelle part Any constituent part of an organelle, an organized structure of distinctive morphology and function. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton, but excludes the plasma membrane.
GO:0044446 intracellular organelle part A constituent part of an intracellular organelle, an organized structure of distinctive morphology and function, occurring within the cell. Includes constituent parts of the nucleus, mitochondria, plastids, vacuoles, vesicles, ribosomes and the cytoskeleton but excludes the plasma membrane.
GO:0044798 nuclear transcription factor complex A protein complex, located in the nucleus, that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.
GO:0090575 RNA polymerase II transcription factor complex A transcription factor complex that acts at promoters of genes transcribed by RNA polymerase II.

21 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
is_a GO:0090575 GO:0016602
part of GO:0044464 GO:0016602
is_a GO:0032991 GO:0016602
part of GO:0043231 GO:0016602
is_a GO:0005575 GO:0016602
part of GO:0005634 GO:0016602
part of GO:0043229 GO:0016602
part of GO:0005623 GO:0016602
part of GO:0043227 GO:0016602
part of GO:0005622 GO:0016602
part of GO:0044424 GO:0016602
part of GO:0005575 GO:0016602
part of GO:0043226 GO:0016602
is_a GO:0043234 GO:0016602
is_a GO:0044422 GO:0016602
is_a GO:0044464 GO:0016602
is_a GO:0044798 GO:0016602
is_a GO:0044424 GO:0016602
is_a GO:0044446 GO:0016602
is_a GO:0005667 GO:0016602
is_a GO:0044428 GO:0016602

3 Synonyms

Name Type
CBF complex synonym
nuclear transcription factor Y complex synonym
NF-Y transcription factor complex synonym