GO Term : GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway GO

Namespace:  biological_process Obsolete:  false
description  The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.

0 Cross References

1 Data Sets

Name URL
InterPro domain GO annotations  

1 Ontology

Name
GO

898 Ontology Annotations

Class GO Term Gene Name Db
OntologyAnnotation GO:0019288 408398 GO
GOAnnotation GO:0019288 408398  
GOAnnotation GO:0019288 163924  
OntologyAnnotation GO:0019288 163924 GO
OntologyAnnotation GO:0019288 evm.model.supercontig_62.104 GO
GOAnnotation GO:0019288 evm.TU.supercontig_62.104  
OntologyAnnotation GO:0019288 29851.m002455 GO
GOAnnotation GO:0019288 29851.t000097  
GOAnnotation GO:0019288 Cucsa.109860  
OntologyAnnotation GO:0019288 Cucsa.109860.1 GO
GOAnnotation GO:0019288 Cucsa.220370  
OntologyAnnotation GO:0019288 Cucsa.220370.1 GO
OntologyAnnotation GO:0019288 orange1.1g016960m GO
OntologyAnnotation GO:0019288 orange1.1g016939m GO
GOAnnotation GO:0019288 orange1.1g016939m.g  
OntologyAnnotation GO:0019288 orange1.1g026546m GO
OntologyAnnotation GO:0019288 orange1.1g022297m GO
OntologyAnnotation GO:0019288 orange1.1g019556m GO
OntologyAnnotation GO:0019288 orange1.1g018062m GO
OntologyAnnotation GO:0019288 orange1.1g017886m GO
OntologyAnnotation GO:0019288 orange1.1g017615m GO
OntologyAnnotation GO:0019288 orange1.1g037064m GO
GOAnnotation GO:0019288 orange1.1g037064m.g  
GOAnnotation GO:0019288 AT4G34350  
OntologyAnnotation GO:0019288 AT4G34350.1 GO
GOAnnotation GO:0019288 Thhalv10025124m.g  
OntologyAnnotation GO:0019288 Thhalv10025124m GO
OntologyAnnotation GO:0019288 Ciclev10028350m GO
GOAnnotation GO:0019288 Ciclev10028350m.g  
OntologyAnnotation GO:0019288 Ciclev10028380m GO

36 Parents

Identifier Name Description
GO:0008299 isoprenoid biosynthetic process The chemical reactions and pathways resulting in the formation of any isoprenoid compound, isoprene (2-methylbuta-1,3-diene) or compounds containing or derived from linked isoprene (3-methyl-2-butenylene) residues.
GO:0006629 lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0008654 phospholipid biosynthetic process The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester.
GO:0006796 phosphate-containing compound metabolic process The chemical reactions and pathways involving the phosphate group, the anion or salt of any phosphoric acid.
GO:0019752 carboxylic acid metabolic process The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).
GO:0044237 cellular metabolic process The chemical reactions and pathways by which individual cells transform chemical substances.
GO:0008610 lipid biosynthetic process The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
GO:0071704 organic substance metabolic process The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon.
GO:0006082 organic acid metabolic process The chemical reactions and pathways involving organic acids, any acidic compound containing carbon in covalent linkage.
GO:0006090 pyruvate metabolic process The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.
GO:0044238 primary metabolic process The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
GO:0006644 phospholipid metabolic process The chemical reactions and pathways involving phospholipids, any lipid containing phosphoric acid as a mono- or diester.
GO:0006081 cellular aldehyde metabolic process The chemical reactions and pathways involving aldehydes, any organic compound with the formula R-CH=O, as carried out by individual cells.
GO:0044249 cellular biosynthetic process The chemical reactions and pathways resulting in the formation of substances, carried out by individual cells.
GO:0009987 cellular process Any process that is carried out at the cellular level, but not necessarily restricted to a single cell. For example, cell communication occurs among more than one cell, but occurs at the cellular level.
GO:0006793 phosphorus metabolic process The chemical reactions and pathways involving the nonmetallic element phosphorus or compounds that contain phosphorus, usually in the form of a phosphate group (PO4).
GO:0044255 cellular lipid metabolic process The chemical reactions and pathways involving lipids, as carried out by individual cells.
GO:1901135 carbohydrate derivative metabolic process The chemical reactions and pathways involving carbohydrate derivative.
GO:0044763 single-organism cellular process Any process that is carried out at the cellular level, occurring within a single organism.
GO:0044699 single-organism process A biological process that involves only one organism.
GO:0008150 biological_process Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
GO:0044710 single-organism metabolic process A metabolic process - chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances - which involves a single organism.
GO:0044711 single-organism biosynthetic process A biosynthetic process - chemical reactions and pathways resulting in the formation of substances - involving a single organism.
GO:1901576 organic substance biosynthetic process The chemical reactions and pathways resulting in the formation of an organic substance, any molecular entity containing carbon.
GO:0032787 monocarboxylic acid metabolic process The chemical reactions and pathways involving monocarboxylic acids, any organic acid containing one carboxyl (COOH) group or anion (COO-).
GO:0043436 oxoacid metabolic process The chemical reactions and pathways involving any oxoacid; an oxoacid is a compound which contains oxygen, at least one other element, and at least one hydrogen bound to oxygen, and which produces a conjugate base by loss of positive hydrogen ion(s) (hydrons).
GO:0044281 small molecule metabolic process The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule.

58 Relations

Relationship
Parent Term . Identifier

Child Term . Identifier
regulates GO:0019288 GO:0010322
regulates GO:0019288 GO:0010322
negatively regulates GO:0019288 GO:0010323
negatively regulates GO:0019288 GO:0010323
regulates GO:0019288 GO:0010323
is_a GO:0009240 GO:0019288
is_a GO:0019682 GO:0019288
is_a GO:0006090 GO:0019288
is_a GO:0006629 GO:0019288
part of GO:0009058 GO:0019288
is_a GO:0044281 GO:0019288
part of GO:0044711 GO:0019288
part of GO:0044238 GO:0019288
part of GO:0006720 GO:0019288
is_a GO:0044249 GO:0019288
is_a GO:0006644 GO:0019288
is_a GO:0009058 GO:0019288
is_a GO:0043436 GO:0019288
is_a GO:0044763 GO:0019288
is_a GO:0008152 GO:0019288
is_a GO:0090407 GO:0019288
is_a GO:0019637 GO:0019288
part of GO:0044763 GO:0019288
is_a GO:0008150 GO:0019288
is_a GO:0071704 GO:0019288
is_a GO:0046490 GO:0019288
is_a GO:0019752 GO:0019288
part of GO:0008299 GO:0019288
part of GO:1901576 GO:0019288
part of GO:0008610 GO:0019288

13 Synonyms

Name Type
isopentenyl diphosphate biosynthesis, non-mevalonate pathway synonym
isopentenyl diphosphate biosynthetic process via 1-deoxy-D-xylulose 5-phosphate synonym
isopentenyl diphosphate biosynthetic process, MEP pathway synonym
isopentenyl diphosphate biosynthetic process, mevalonate-independent synonym
isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway synonym
isopentenyl diphosphate biosynthetic process, non-mevalonate pathway synonym
isopentenyl diphosphate formation, mevalonate-independent pathway synonym
isopentenyl diphosphate synthesis, mevalonate-independent pathway synonym
mevalonate-independent isopentenyl diphosphate biosynthesis synonym
mevalonate-independent isopentenyl diphosphate biosynthetic process synonym
non-MVA pathway synonym
isopentenyl diphosphate anabolism, mevalonate-independent pathway synonym
isopentenyl diphosphate biosynthesis, mevalonate-independent synonym