Gene : SapurV1A.2802s0020 S. purpurea v1.0
Defline:  (1 of 3) 2.1.1.190 - 23S rRNA (uracil(1939)-C(5))-methyltransferase / RNA uridine methyltransferase A Genomic Order:  2
Name:  ? SapurV1A.2802s0020 Secondary Identifier:  ? PAC:31433494
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2802s0020 0.5kb upstream 0.5kb upstream 8453 true Scaffold2802: 9719-18171 Salix purpurea
SapurV1A.2802s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold2802: 9719-10218 Salix purpurea
SapurV1A.2802s0020 0.5kb downstream 0.5kb downstream 8453 true Scaffold2802: 10219-18671 Salix purpurea
SapurV1A.2802s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold2802: 18172-18671 Salix purpurea
SapurV1A.2802s0020 1.0kb upstream 1.0kb upstream 8953 true Scaffold2802: 9219-18171 Salix purpurea
SapurV1A.2802s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold2802: 9219-10218 Salix purpurea
SapurV1A.2802s0020 1.0kb downstream 1.0kb downstream 8953 true Scaffold2802: 10219-19171 Salix purpurea
SapurV1A.2802s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold2802: 18172-19171 Salix purpurea
SapurV1A.2802s0020 2.0kb upstream 2.0kb upstream 9953 true Scaffold2802: 8219-18171 Salix purpurea
SapurV1A.2802s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold2802: 8219-10218 Salix purpurea
SapurV1A.2802s0020 2.0kb downstream 2.0kb downstream 9953 true Scaffold2802: 10219-20171 Salix purpurea
SapurV1A.2802s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold2802: 18172-20171 Salix purpurea
SapurV1A.2802s0020 5.0kb upstream 5.0kb upstream 12953 true Scaffold2802: 5219-18171 Salix purpurea
SapurV1A.2802s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold2802: 5219-10218 Salix purpurea
SapurV1A.2802s0020 5.0kb downstream 5.0kb downstream 10554 true Scaffold2802: 10219-20772 Salix purpurea
SapurV1A.2802s0020 5.0kb downstream 5.0kb downstream 2601 false Scaffold2802: 18172-20772 Salix purpurea
SapurV1A.2802s0020 10.0kb upstream 10.0kb upstream 17953 true Scaffold2802: 219-18171 Salix purpurea
SapurV1A.2802s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold2802: 219-10218 Salix purpurea
SapurV1A.2802s0020 10.0kb downstream 10.0kb downstream 10554 true Scaffold2802: 10219-20772 Salix purpurea
SapurV1A.2802s0020 10.0kb downstream 10.0kb downstream 2601 false Scaffold2802: 18172-20772 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451608 5262 Malpighiales View MSA
124241822 5268 Malvidae View MSA
124060880 5270 Rosid View MSA
123737477 5271 Pentapetalae View MSA
122788250 5272 Eudicot View MSA
122042152 5273 Angiosperm View MSA
121345091 5274 Embryophyte View MSA
123424748 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain