Gene : SapurV1A.0376s0050 S. purpurea v1.0
Defline:  (1 of 2) PTHR23083//PTHR23083:SF430 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED Genomic Order:  5
Name:  ? SapurV1A.0376s0050 Secondary Identifier:  ? PAC:31412071
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0376s0050 0.5kb upstream 0.5kb upstream 6712 true Scaffold0376: 33921-40632 Salix purpurea
SapurV1A.0376s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold0376: 33921-34420 Salix purpurea
SapurV1A.0376s0050 0.5kb downstream 0.5kb downstream 6712 true Scaffold0376: 34421-41132 Salix purpurea
SapurV1A.0376s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold0376: 40633-41132 Salix purpurea
SapurV1A.0376s0050 1.0kb upstream 1.0kb upstream 7212 true Scaffold0376: 33421-40632 Salix purpurea
SapurV1A.0376s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold0376: 33421-34420 Salix purpurea
SapurV1A.0376s0050 1.0kb downstream 1.0kb downstream 7212 true Scaffold0376: 34421-41632 Salix purpurea
SapurV1A.0376s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold0376: 40633-41632 Salix purpurea
SapurV1A.0376s0050 2.0kb upstream 2.0kb upstream 8212 true Scaffold0376: 32421-40632 Salix purpurea
SapurV1A.0376s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold0376: 32421-34420 Salix purpurea
SapurV1A.0376s0050 2.0kb downstream 2.0kb downstream 8212 true Scaffold0376: 34421-42632 Salix purpurea
SapurV1A.0376s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold0376: 40633-42632 Salix purpurea
SapurV1A.0376s0050 5.0kb upstream 5.0kb upstream 11212 true Scaffold0376: 29421-40632 Salix purpurea
SapurV1A.0376s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold0376: 29421-34420 Salix purpurea
SapurV1A.0376s0050 5.0kb downstream 5.0kb downstream 11212 true Scaffold0376: 34421-45632 Salix purpurea
SapurV1A.0376s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold0376: 40633-45632 Salix purpurea
SapurV1A.0376s0050 10.0kb upstream 10.0kb upstream 16212 true Scaffold0376: 24421-40632 Salix purpurea
SapurV1A.0376s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold0376: 24421-34420 Salix purpurea
SapurV1A.0376s0050 10.0kb downstream 10.0kb downstream 16212 true Scaffold0376: 34421-50632 Salix purpurea
SapurV1A.0376s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold0376: 40633-50632 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452116 5262 Malpighiales View MSA
124253364 5268 Malvidae View MSA
124067211 5270 Rosid View MSA
123736449 5271 Pentapetalae View MSA
122791589 5272 Eudicot View MSA
122042735 5273 Angiosperm View MSA
121349439 5274 Embryophyte View MSA
123381312 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain