Gene : SapurV1A.1656s0020 S. purpurea v1.0
Defline:  (1 of 1) PTHR12411//PTHR12411:SF316 - CYSTEINE PROTEASE FAMILY C1-RELATED // CATHEPSIN F Genomic Order:  1744
Name:  ? SapurV1A.1656s0020 Secondary Identifier:  ? PAC:31412941
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1656s0020 0.5kb upstream 0.5kb upstream 1762 true chr10: 17541801-17543562 Salix purpurea
SapurV1A.1656s0020 0.5kb upstream 0.5kb upstream 500 false chr10: 17543063-17543562 Salix purpurea
SapurV1A.1656s0020 0.5kb downstream 0.5kb downstream 1762 true chr10: 17541301-17543062 Salix purpurea
SapurV1A.1656s0020 0.5kb downstream 0.5kb downstream 500 false chr10: 17541301-17541800 Salix purpurea
SapurV1A.1656s0020 1.0kb upstream 1.0kb upstream 2262 true chr10: 17541801-17544062 Salix purpurea
SapurV1A.1656s0020 1.0kb upstream 1.0kb upstream 1000 false chr10: 17543063-17544062 Salix purpurea
SapurV1A.1656s0020 1.0kb downstream 1.0kb downstream 2262 true chr10: 17540801-17543062 Salix purpurea
SapurV1A.1656s0020 1.0kb downstream 1.0kb downstream 1000 false chr10: 17540801-17541800 Salix purpurea
SapurV1A.1656s0020 2.0kb upstream 2.0kb upstream 3262 true chr10: 17541801-17545062 Salix purpurea
SapurV1A.1656s0020 2.0kb upstream 2.0kb upstream 2000 false chr10: 17543063-17545062 Salix purpurea
SapurV1A.1656s0020 2.0kb downstream 2.0kb downstream 3262 true chr10: 17539801-17543062 Salix purpurea
SapurV1A.1656s0020 2.0kb downstream 2.0kb downstream 2000 false chr10: 17539801-17541800 Salix purpurea
SapurV1A.1656s0020 5.0kb upstream 5.0kb upstream 6262 true chr10: 17541801-17548062 Salix purpurea
SapurV1A.1656s0020 5.0kb upstream 5.0kb upstream 5000 false chr10: 17543063-17548062 Salix purpurea
SapurV1A.1656s0020 5.0kb downstream 5.0kb downstream 6262 true chr10: 17536801-17543062 Salix purpurea
SapurV1A.1656s0020 5.0kb downstream 5.0kb downstream 5000 false chr10: 17536801-17541800 Salix purpurea
SapurV1A.1656s0020 10.0kb upstream 10.0kb upstream 11262 true chr10: 17541801-17553062 Salix purpurea
SapurV1A.1656s0020 10.0kb upstream 10.0kb upstream 10000 false chr10: 17543063-17553062 Salix purpurea
SapurV1A.1656s0020 10.0kb downstream 10.0kb downstream 11262 true chr10: 17531801-17543062 Salix purpurea
SapurV1A.1656s0020 10.0kb downstream 10.0kb downstream 10000 false chr10: 17531801-17541800 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427559 5262 Malpighiales View MSA
124255275 5268 Malvidae View MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain