Gene : Medtr0045s0060 M. truncatula Mt4.0v1
Defline:  (1 of 130) KOG0157 - Cytochrome P450 CYP4/CYP19/CYP26 subfamilies Description:  cytochrome P450 family 90 protein
Genomic Order:  2 Name:  ? Medtr0045s0060
Secondary Identifier:  ? PAC:31084910
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0045s0060 0.5kb upstream 0.5kb upstream 6304   true scaffold0045: 22094-28397 Medicago truncatula
Medtr0045s0060 0.5kb upstream 0.5kb upstream 500   false scaffold0045: 22094-22593 Medicago truncatula
Medtr0045s0060 0.5kb downstream 0.5kb downstream 6304   true scaffold0045: 22594-28897 Medicago truncatula
Medtr0045s0060 0.5kb downstream 0.5kb downstream 500   false scaffold0045: 28398-28897 Medicago truncatula
Medtr0045s0060 1.0kb upstream 1.0kb upstream 6804   true scaffold0045: 21594-28397 Medicago truncatula
Medtr0045s0060 1.0kb upstream 1.0kb upstream 1000   false scaffold0045: 21594-22593 Medicago truncatula
Medtr0045s0060 1.0kb downstream 1.0kb downstream 6804   true scaffold0045: 22594-29397 Medicago truncatula
Medtr0045s0060 1.0kb downstream 1.0kb downstream 1000   false scaffold0045: 28398-29397 Medicago truncatula
Medtr0045s0060 2.0kb upstream 2.0kb upstream 7804   true scaffold0045: 20594-28397 Medicago truncatula
Medtr0045s0060 2.0kb upstream 2.0kb upstream 2000   false scaffold0045: 20594-22593 Medicago truncatula
Medtr0045s0060 2.0kb downstream 2.0kb downstream 7804   true scaffold0045: 22594-30397 Medicago truncatula
Medtr0045s0060 2.0kb downstream 2.0kb downstream 2000   false scaffold0045: 28398-30397 Medicago truncatula
Medtr0045s0060 5.0kb upstream 5.0kb upstream 10804   true scaffold0045: 17594-28397 Medicago truncatula
Medtr0045s0060 5.0kb upstream 5.0kb upstream 5000   false scaffold0045: 17594-22593 Medicago truncatula
Medtr0045s0060 5.0kb downstream 5.0kb downstream 10804   true scaffold0045: 22594-33397 Medicago truncatula
Medtr0045s0060 5.0kb downstream 5.0kb downstream 5000   false scaffold0045: 28398-33397 Medicago truncatula
Medtr0045s0060 10.0kb upstream 10.0kb upstream 15804   true scaffold0045: 12594-28397 Medicago truncatula
Medtr0045s0060 10.0kb upstream 10.0kb upstream 10000   false scaffold0045: 12594-22593 Medicago truncatula
Medtr0045s0060 10.0kb downstream 10.0kb downstream 15804   true scaffold0045: 22594-38397 Medicago truncatula
Medtr0045s0060 10.0kb downstream 10.0kb downstream 10000   false scaffold0045: 28398-38397 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311343 5265 Fabidae View MSA
124050798 5270 Rosid View MSA
123744088 5271 Pentapetalae View MSA
122794567 5272 Eudicot View MSA
122051699 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121312618 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.29        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain