Gene : Medtr8g102540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31811:SF0 - TRNA A64-2'-O-RIBOSYLPHOSPHATE TRANSFERASE Description:  initiator tRNA phosphoribosyl-transferase, putative
Genomic Order:  5454 Name:  ? Medtr8g102540
Secondary Identifier:  ? PAC:31074474
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g102540 0.5kb upstream 0.5kb upstream 4372   true chr8: 43171598-43175969 Medicago truncatula
Medtr8g102540 0.5kb upstream 0.5kb upstream 500   false chr8: 43171598-43172097 Medicago truncatula
Medtr8g102540 0.5kb downstream 0.5kb downstream 4372   true chr8: 43172098-43176469 Medicago truncatula
Medtr8g102540 0.5kb downstream 0.5kb downstream 500   false chr8: 43175970-43176469 Medicago truncatula
Medtr8g102540 1.0kb upstream 1.0kb upstream 4872   true chr8: 43171098-43175969 Medicago truncatula
Medtr8g102540 1.0kb upstream 1.0kb upstream 1000   false chr8: 43171098-43172097 Medicago truncatula
Medtr8g102540 1.0kb downstream 1.0kb downstream 4872   true chr8: 43172098-43176969 Medicago truncatula
Medtr8g102540 1.0kb downstream 1.0kb downstream 1000   false chr8: 43175970-43176969 Medicago truncatula
Medtr8g102540 2.0kb upstream 2.0kb upstream 5872   true chr8: 43170098-43175969 Medicago truncatula
Medtr8g102540 2.0kb upstream 2.0kb upstream 2000   false chr8: 43170098-43172097 Medicago truncatula
Medtr8g102540 2.0kb downstream 2.0kb downstream 5872   true chr8: 43172098-43177969 Medicago truncatula
Medtr8g102540 2.0kb downstream 2.0kb downstream 2000   false chr8: 43175970-43177969 Medicago truncatula
Medtr8g102540 5.0kb upstream 5.0kb upstream 8872   true chr8: 43167098-43175969 Medicago truncatula
Medtr8g102540 5.0kb upstream 5.0kb upstream 5000   false chr8: 43167098-43172097 Medicago truncatula
Medtr8g102540 5.0kb downstream 5.0kb downstream 8872   true chr8: 43172098-43180969 Medicago truncatula
Medtr8g102540 5.0kb downstream 5.0kb downstream 5000   false chr8: 43175970-43180969 Medicago truncatula
Medtr8g102540 10.0kb upstream 10.0kb upstream 13872   true chr8: 43162098-43175969 Medicago truncatula
Medtr8g102540 10.0kb upstream 10.0kb upstream 10000   false chr8: 43162098-43172097 Medicago truncatula
Medtr8g102540 10.0kb downstream 10.0kb downstream 13872   true chr8: 43172098-43185969 Medicago truncatula
Medtr8g102540 10.0kb downstream 10.0kb downstream 10000   false chr8: 43175970-43185969 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305678 5265 Fabidae View MSA
124064987 5270 Rosid View MSA
123736577 5271 Pentapetalae View MSA
122790906 5272 Eudicot View MSA
122043011 5273 Angiosperm View MSA
121346582 5274 Embryophyte View MSA
123424647 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.699       High
cufflinks 0.423        
cufflinks 0.445        
cufflinks 0.343        
cufflinks 0.626        
cufflinks 0.229       Low
cufflinks 0.789       High
cufflinks 0.405        
cufflinks 0.556        

0 Strain