Gene : Medtr8g042490 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10791//PTHR10791:SF57 - RAG1-ACTIVATING PROTEIN 1 Description:  bidirectional sugar transporter
Genomic Order:  2125 Name:  ? Medtr8g042490
Secondary Identifier:  ? PAC:31073248
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g042490 0.5kb upstream 0.5kb upstream 2129   true chr8: 16376847-16378975 Medicago truncatula
Medtr8g042490 0.5kb upstream 0.5kb upstream 500   false chr8: 16376847-16377346 Medicago truncatula
Medtr8g042490 0.5kb downstream 0.5kb downstream 2129   true chr8: 16377347-16379475 Medicago truncatula
Medtr8g042490 0.5kb downstream 0.5kb downstream 500   false chr8: 16378976-16379475 Medicago truncatula
Medtr8g042490 1.0kb upstream 1.0kb upstream 2629   true chr8: 16376347-16378975 Medicago truncatula
Medtr8g042490 1.0kb upstream 1.0kb upstream 1000   false chr8: 16376347-16377346 Medicago truncatula
Medtr8g042490 1.0kb downstream 1.0kb downstream 2629   true chr8: 16377347-16379975 Medicago truncatula
Medtr8g042490 1.0kb downstream 1.0kb downstream 1000   false chr8: 16378976-16379975 Medicago truncatula
Medtr8g042490 2.0kb upstream 2.0kb upstream 3629   true chr8: 16375347-16378975 Medicago truncatula
Medtr8g042490 2.0kb upstream 2.0kb upstream 2000   false chr8: 16375347-16377346 Medicago truncatula
Medtr8g042490 2.0kb downstream 2.0kb downstream 3629   true chr8: 16377347-16380975 Medicago truncatula
Medtr8g042490 2.0kb downstream 2.0kb downstream 2000   false chr8: 16378976-16380975 Medicago truncatula
Medtr8g042490 5.0kb upstream 5.0kb upstream 6629   true chr8: 16372347-16378975 Medicago truncatula
Medtr8g042490 5.0kb upstream 5.0kb upstream 5000   false chr8: 16372347-16377346 Medicago truncatula
Medtr8g042490 5.0kb downstream 5.0kb downstream 6629   true chr8: 16377347-16383975 Medicago truncatula
Medtr8g042490 5.0kb downstream 5.0kb downstream 5000   false chr8: 16378976-16383975 Medicago truncatula
Medtr8g042490 10.0kb upstream 10.0kb upstream 11629   true chr8: 16367347-16378975 Medicago truncatula
Medtr8g042490 10.0kb upstream 10.0kb upstream 10000   false chr8: 16367347-16377346 Medicago truncatula
Medtr8g042490 10.0kb downstream 10.0kb downstream 11629   true chr8: 16377347-16388975 Medicago truncatula
Medtr8g042490 10.0kb downstream 10.0kb downstream 10000   false chr8: 16378976-16388975 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311090 5265 Fabidae View MSA
124072962 5270 Rosid View MSA
123749486 5271 Pentapetalae View MSA
122796562 5272 Eudicot View MSA
122048091 5273 Angiosperm View MSA
121310847 5274 Embryophyte View MSA
123348232 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.444        
cufflinks 2.224       High
cufflinks 0.914        
cufflinks 0.378       Low
cufflinks 2.428       High
cufflinks 0.33       Low
cufflinks 1.48        
cufflinks 1.209        
cufflinks 1.004        

0 Strain