Gene : Medtr8g027770 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24031:SF265 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 25-RELATED Description:  DEAD-box ATP-dependent RNA helicase family protein
Genomic Order:  1328 Name:  ? Medtr8g027770
Secondary Identifier:  ? PAC:31076475
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g027770 0.5kb upstream 0.5kb upstream 6517   true chr8: 10105760-10112276 Medicago truncatula
Medtr8g027770 0.5kb upstream 0.5kb upstream 500   false chr8: 10111777-10112276 Medicago truncatula
Medtr8g027770 0.5kb downstream 0.5kb downstream 6517   true chr8: 10105260-10111776 Medicago truncatula
Medtr8g027770 0.5kb downstream 0.5kb downstream 500   false chr8: 10105260-10105759 Medicago truncatula
Medtr8g027770 1.0kb upstream 1.0kb upstream 7017   true chr8: 10105760-10112776 Medicago truncatula
Medtr8g027770 1.0kb upstream 1.0kb upstream 1000   false chr8: 10111777-10112776 Medicago truncatula
Medtr8g027770 1.0kb downstream 1.0kb downstream 7017   true chr8: 10104760-10111776 Medicago truncatula
Medtr8g027770 1.0kb downstream 1.0kb downstream 1000   false chr8: 10104760-10105759 Medicago truncatula
Medtr8g027770 2.0kb upstream 2.0kb upstream 8017   true chr8: 10105760-10113776 Medicago truncatula
Medtr8g027770 2.0kb upstream 2.0kb upstream 2000   false chr8: 10111777-10113776 Medicago truncatula
Medtr8g027770 2.0kb downstream 2.0kb downstream 8017   true chr8: 10103760-10111776 Medicago truncatula
Medtr8g027770 2.0kb downstream 2.0kb downstream 2000   false chr8: 10103760-10105759 Medicago truncatula
Medtr8g027770 5.0kb upstream 5.0kb upstream 11017   true chr8: 10105760-10116776 Medicago truncatula
Medtr8g027770 5.0kb upstream 5.0kb upstream 5000   false chr8: 10111777-10116776 Medicago truncatula
Medtr8g027770 5.0kb downstream 5.0kb downstream 11017   true chr8: 10100760-10111776 Medicago truncatula
Medtr8g027770 5.0kb downstream 5.0kb downstream 5000   false chr8: 10100760-10105759 Medicago truncatula
Medtr8g027770 10.0kb upstream 10.0kb upstream 16017   true chr8: 10105760-10121776 Medicago truncatula
Medtr8g027770 10.0kb upstream 10.0kb upstream 10000   false chr8: 10111777-10121776 Medicago truncatula
Medtr8g027770 10.0kb downstream 10.0kb downstream 16017   true chr8: 10095760-10111776 Medicago truncatula
Medtr8g027770 10.0kb downstream 10.0kb downstream 10000   false chr8: 10095760-10105759 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311922 5265 Fabidae View MSA
124063521 5270 Rosid View MSA
123738215 5271 Pentapetalae View MSA
122794289 5272 Eudicot View MSA
122047115 5273 Angiosperm View MSA
121350061 5274 Embryophyte View MSA
123424072 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.93        
cufflinks 5.153        
cufflinks 10.784     High High
cufflinks 0.809        
cufflinks 21.301     High High
cufflinks 0.254       Low
cufflinks 0.856        
cufflinks 9.019     High  
cufflinks 1.174        

0 Strain