Gene : Medtr8g035610 M. truncatula Mt4.0v1
Defline:  (1 of 7) 4.1.1.36 - Phosphopantothenoylcysteine decarboxylase / N-((R)-4'-phosphopantothenoyl)-L-cysteine carboxy-lyase Description:  phosphopantothenoylcysteine decarboxylase
Genomic Order:  1719 Name:  ? Medtr8g035610
Secondary Identifier:  ? PAC:31070241
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula COA-PWY Medicago truncatula pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr8g035610 0.5kb upstream 0.5kb upstream 3889   true chr8: 12983011-12986899 Medicago truncatula
Medtr8g035610 0.5kb upstream 0.5kb upstream 500   false chr8: 12986400-12986899 Medicago truncatula
Medtr8g035610 0.5kb downstream 0.5kb downstream 3889   true chr8: 12982511-12986399 Medicago truncatula
Medtr8g035610 0.5kb downstream 0.5kb downstream 500   false chr8: 12982511-12983010 Medicago truncatula
Medtr8g035610 1.0kb upstream 1.0kb upstream 4389   true chr8: 12983011-12987399 Medicago truncatula
Medtr8g035610 1.0kb upstream 1.0kb upstream 1000   false chr8: 12986400-12987399 Medicago truncatula
Medtr8g035610 1.0kb downstream 1.0kb downstream 4389   true chr8: 12982011-12986399 Medicago truncatula
Medtr8g035610 1.0kb downstream 1.0kb downstream 1000   false chr8: 12982011-12983010 Medicago truncatula
Medtr8g035610 2.0kb upstream 2.0kb upstream 5389   true chr8: 12983011-12988399 Medicago truncatula
Medtr8g035610 2.0kb upstream 2.0kb upstream 2000   false chr8: 12986400-12988399 Medicago truncatula
Medtr8g035610 2.0kb downstream 2.0kb downstream 5389   true chr8: 12981011-12986399 Medicago truncatula
Medtr8g035610 2.0kb downstream 2.0kb downstream 2000   false chr8: 12981011-12983010 Medicago truncatula
Medtr8g035610 5.0kb upstream 5.0kb upstream 8389   true chr8: 12983011-12991399 Medicago truncatula
Medtr8g035610 5.0kb upstream 5.0kb upstream 5000   false chr8: 12986400-12991399 Medicago truncatula
Medtr8g035610 5.0kb downstream 5.0kb downstream 8389   true chr8: 12978011-12986399 Medicago truncatula
Medtr8g035610 5.0kb downstream 5.0kb downstream 5000   false chr8: 12978011-12983010 Medicago truncatula
Medtr8g035610 10.0kb upstream 10.0kb upstream 13389   true chr8: 12983011-12996399 Medicago truncatula
Medtr8g035610 10.0kb upstream 10.0kb upstream 10000   false chr8: 12986400-12996399 Medicago truncatula
Medtr8g035610 10.0kb downstream 10.0kb downstream 13389   true chr8: 12973011-12986399 Medicago truncatula
Medtr8g035610 10.0kb downstream 10.0kb downstream 10000   false chr8: 12973011-12983010 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310466 5265 Fabidae View MSA
124065086 5270 Rosid View MSA
123739959 5271 Pentapetalae View MSA
122787988 5272 Eudicot View MSA
122043934 5273 Angiosperm View MSA
121347279 5274 Embryophyte View MSA
123427433 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.46       Low
cufflinks 0.905        
cufflinks 0.866        
cufflinks 3.742       High
cufflinks 1.406        
cufflinks 1.533        
cufflinks 1.728        
cufflinks 0.799        
cufflinks 2.458       High

0 Strain