Gene : Medtr7g116425 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1 Description:  translational activator GCN1-like protein
Genomic Order:  6049 Name:  ? Medtr7g116425
Secondary Identifier:  ? PAC:31081000
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g116425 0.5kb upstream 0.5kb upstream 30886 true chr7: 48022334-48053219 Medicago truncatula
Medtr7g116425 0.5kb upstream 0.5kb upstream 500 false chr7: 48052720-48053219 Medicago truncatula
Medtr7g116425 0.5kb downstream 0.5kb downstream 30886 true chr7: 48021834-48052719 Medicago truncatula
Medtr7g116425 0.5kb downstream 0.5kb downstream 500 false chr7: 48021834-48022333 Medicago truncatula
Medtr7g116425 1.0kb upstream 1.0kb upstream 31386 true chr7: 48022334-48053719 Medicago truncatula
Medtr7g116425 1.0kb upstream 1.0kb upstream 1000 false chr7: 48052720-48053719 Medicago truncatula
Medtr7g116425 1.0kb downstream 1.0kb downstream 31386 true chr7: 48021334-48052719 Medicago truncatula
Medtr7g116425 1.0kb downstream 1.0kb downstream 1000 false chr7: 48021334-48022333 Medicago truncatula
Medtr7g116425 2.0kb upstream 2.0kb upstream 32386 true chr7: 48022334-48054719 Medicago truncatula
Medtr7g116425 2.0kb upstream 2.0kb upstream 2000 false chr7: 48052720-48054719 Medicago truncatula
Medtr7g116425 2.0kb downstream 2.0kb downstream 32386 true chr7: 48020334-48052719 Medicago truncatula
Medtr7g116425 2.0kb downstream 2.0kb downstream 2000 false chr7: 48020334-48022333 Medicago truncatula
Medtr7g116425 5.0kb upstream 5.0kb upstream 35386 true chr7: 48022334-48057719 Medicago truncatula
Medtr7g116425 5.0kb upstream 5.0kb upstream 5000 false chr7: 48052720-48057719 Medicago truncatula
Medtr7g116425 5.0kb downstream 5.0kb downstream 35386 true chr7: 48017334-48052719 Medicago truncatula
Medtr7g116425 5.0kb downstream 5.0kb downstream 5000 false chr7: 48017334-48022333 Medicago truncatula
Medtr7g116425 10.0kb upstream 10.0kb upstream 40386 true chr7: 48022334-48062719 Medicago truncatula
Medtr7g116425 10.0kb upstream 10.0kb upstream 10000 false chr7: 48052720-48062719 Medicago truncatula
Medtr7g116425 10.0kb downstream 10.0kb downstream 40386 true chr7: 48012334-48052719 Medicago truncatula
Medtr7g116425 10.0kb downstream 10.0kb downstream 10000 false chr7: 48012334-48022333 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303043 5265 Fabidae View MSA
124050351 5270 Rosid View MSA
123740065 5271 Pentapetalae View MSA
122789609 5272 Eudicot View MSA
122050896 5273 Angiosperm View MSA
121346458 5274 Embryophyte View MSA
123425740 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.205        
cufflinks 2.961        
cufflinks 3.907        
cufflinks 0.664       Low
cufflinks 5.903       High
cufflinks 0.408       Low
cufflinks 1.833        
cufflinks 3.307        
cufflinks 2.099        

0 Strain