Gene : Medtr7g406850 M. truncatula Mt4.0v1
Defline:  (1 of 5) 6.1.1.14 - Glycine--tRNA ligase / Glycyl-tRNA synthetase Description:  glycyl-tRNA synthetase/glycine-tRNA ligase
Genomic Order:  105 Name:  ? Medtr7g406850
Secondary Identifier:  ? PAC:31079434
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g406850 0.5kb upstream 0.5kb upstream 5991 true chr7: 936679-942669 Medicago truncatula
Medtr7g406850 0.5kb upstream 0.5kb upstream 500 false chr7: 942170-942669 Medicago truncatula
Medtr7g406850 0.5kb downstream 0.5kb downstream 5991 true chr7: 936179-942169 Medicago truncatula
Medtr7g406850 0.5kb downstream 0.5kb downstream 500 false chr7: 936179-936678 Medicago truncatula
Medtr7g406850 1.0kb upstream 1.0kb upstream 6491 true chr7: 936679-943169 Medicago truncatula
Medtr7g406850 1.0kb upstream 1.0kb upstream 1000 false chr7: 942170-943169 Medicago truncatula
Medtr7g406850 1.0kb downstream 1.0kb downstream 6491 true chr7: 935679-942169 Medicago truncatula
Medtr7g406850 1.0kb downstream 1.0kb downstream 1000 false chr7: 935679-936678 Medicago truncatula
Medtr7g406850 2.0kb upstream 2.0kb upstream 7491 true chr7: 936679-944169 Medicago truncatula
Medtr7g406850 2.0kb upstream 2.0kb upstream 2000 false chr7: 942170-944169 Medicago truncatula
Medtr7g406850 2.0kb downstream 2.0kb downstream 7491 true chr7: 934679-942169 Medicago truncatula
Medtr7g406850 2.0kb downstream 2.0kb downstream 2000 false chr7: 934679-936678 Medicago truncatula
Medtr7g406850 5.0kb upstream 5.0kb upstream 10491 true chr7: 936679-947169 Medicago truncatula
Medtr7g406850 5.0kb upstream 5.0kb upstream 5000 false chr7: 942170-947169 Medicago truncatula
Medtr7g406850 5.0kb downstream 5.0kb downstream 10491 true chr7: 931679-942169 Medicago truncatula
Medtr7g406850 5.0kb downstream 5.0kb downstream 5000 false chr7: 931679-936678 Medicago truncatula
Medtr7g406850 10.0kb upstream 10.0kb upstream 15491 true chr7: 936679-952169 Medicago truncatula
Medtr7g406850 10.0kb upstream 10.0kb upstream 10000 false chr7: 942170-952169 Medicago truncatula
Medtr7g406850 10.0kb downstream 10.0kb downstream 15491 true chr7: 926679-942169 Medicago truncatula
Medtr7g406850 10.0kb downstream 10.0kb downstream 10000 false chr7: 926679-936678 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302304 5265 Fabidae View MSA
124063587 5270 Rosid View MSA
123751424 5271 Pentapetalae View MSA
122793864 5272 Eudicot View MSA
122047180 5273 Angiosperm View MSA
121348773 5274 Embryophyte View MSA
123423981 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.158        
cufflinks 15.678     High  
cufflinks 16.323     High  
cufflinks 5.569        
cufflinks 20.459     High High
cufflinks 3.02       Low
cufflinks 4.364        
cufflinks 15.229     High  
cufflinks 9.692        

0 Strain