Gene : Medtr7g117870 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.7.1.52 - Fucokinase / L-fucose kinase Description:  L-fucokinase/GDP-L-fucose pyrophosphorylase
Genomic Order:  6166 Name:  ? Medtr7g117870
Secondary Identifier:  ? PAC:31082935
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g117870 0.5kb upstream 0.5kb upstream 6877 true chr7: 48912166-48919042 Medicago truncatula
Medtr7g117870 0.5kb upstream 0.5kb upstream 500 false chr7: 48918543-48919042 Medicago truncatula
Medtr7g117870 0.5kb downstream 0.5kb downstream 6877 true chr7: 48911666-48918542 Medicago truncatula
Medtr7g117870 0.5kb downstream 0.5kb downstream 500 false chr7: 48911666-48912165 Medicago truncatula
Medtr7g117870 1.0kb upstream 1.0kb upstream 7377 true chr7: 48912166-48919542 Medicago truncatula
Medtr7g117870 1.0kb upstream 1.0kb upstream 1000 false chr7: 48918543-48919542 Medicago truncatula
Medtr7g117870 1.0kb downstream 1.0kb downstream 7377 true chr7: 48911166-48918542 Medicago truncatula
Medtr7g117870 1.0kb downstream 1.0kb downstream 1000 false chr7: 48911166-48912165 Medicago truncatula
Medtr7g117870 2.0kb upstream 2.0kb upstream 8377 true chr7: 48912166-48920542 Medicago truncatula
Medtr7g117870 2.0kb upstream 2.0kb upstream 2000 false chr7: 48918543-48920542 Medicago truncatula
Medtr7g117870 2.0kb downstream 2.0kb downstream 8377 true chr7: 48910166-48918542 Medicago truncatula
Medtr7g117870 2.0kb downstream 2.0kb downstream 2000 false chr7: 48910166-48912165 Medicago truncatula
Medtr7g117870 5.0kb upstream 5.0kb upstream 11377 true chr7: 48912166-48923542 Medicago truncatula
Medtr7g117870 5.0kb upstream 5.0kb upstream 5000 false chr7: 48918543-48923542 Medicago truncatula
Medtr7g117870 5.0kb downstream 5.0kb downstream 11377 true chr7: 48907166-48918542 Medicago truncatula
Medtr7g117870 5.0kb downstream 5.0kb downstream 5000 false chr7: 48907166-48912165 Medicago truncatula
Medtr7g117870 10.0kb upstream 10.0kb upstream 16377 true chr7: 48912166-48928542 Medicago truncatula
Medtr7g117870 10.0kb upstream 10.0kb upstream 10000 false chr7: 48918543-48928542 Medicago truncatula
Medtr7g117870 10.0kb downstream 10.0kb downstream 16377 true chr7: 48902166-48918542 Medicago truncatula
Medtr7g117870 10.0kb downstream 10.0kb downstream 10000 false chr7: 48902166-48912165 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300663 5265 Fabidae View MSA
124065947 5270 Rosid View MSA
123736702 5271 Pentapetalae View MSA
122792223 5272 Eudicot View MSA
122043960 5273 Angiosperm View MSA
121344120 5274 Embryophyte View MSA
123379978 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.026        
cufflinks 2.432        
cufflinks 2.139        
cufflinks 0.367        
cufflinks 3.394        
cufflinks 0.019     Low Low
cufflinks 0.95        
cufflinks 1.781        
cufflinks 1.045        

0 Strain