Gene : Medtr7g069430 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13634 - RIBOSOME BIOGENESIS PROTEIN BRIX Description:  ribosomal RNA processing brix domain protein
Genomic Order:  2849 Name:  ? Medtr7g069430
Secondary Identifier:  ? PAC:31083155
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g069430 0.5kb upstream 0.5kb upstream 4092 true chr7: 25560305-25564396 Medicago truncatula
Medtr7g069430 0.5kb upstream 0.5kb upstream 500 false chr7: 25563897-25564396 Medicago truncatula
Medtr7g069430 0.5kb downstream 0.5kb downstream 4092 true chr7: 25559805-25563896 Medicago truncatula
Medtr7g069430 0.5kb downstream 0.5kb downstream 500 false chr7: 25559805-25560304 Medicago truncatula
Medtr7g069430 1.0kb upstream 1.0kb upstream 4592 true chr7: 25560305-25564896 Medicago truncatula
Medtr7g069430 1.0kb upstream 1.0kb upstream 1000 false chr7: 25563897-25564896 Medicago truncatula
Medtr7g069430 1.0kb downstream 1.0kb downstream 4592 true chr7: 25559305-25563896 Medicago truncatula
Medtr7g069430 1.0kb downstream 1.0kb downstream 1000 false chr7: 25559305-25560304 Medicago truncatula
Medtr7g069430 2.0kb upstream 2.0kb upstream 5592 true chr7: 25560305-25565896 Medicago truncatula
Medtr7g069430 2.0kb upstream 2.0kb upstream 2000 false chr7: 25563897-25565896 Medicago truncatula
Medtr7g069430 2.0kb downstream 2.0kb downstream 5592 true chr7: 25558305-25563896 Medicago truncatula
Medtr7g069430 2.0kb downstream 2.0kb downstream 2000 false chr7: 25558305-25560304 Medicago truncatula
Medtr7g069430 5.0kb upstream 5.0kb upstream 8592 true chr7: 25560305-25568896 Medicago truncatula
Medtr7g069430 5.0kb upstream 5.0kb upstream 5000 false chr7: 25563897-25568896 Medicago truncatula
Medtr7g069430 5.0kb downstream 5.0kb downstream 8592 true chr7: 25555305-25563896 Medicago truncatula
Medtr7g069430 5.0kb downstream 5.0kb downstream 5000 false chr7: 25555305-25560304 Medicago truncatula
Medtr7g069430 10.0kb upstream 10.0kb upstream 13592 true chr7: 25560305-25573896 Medicago truncatula
Medtr7g069430 10.0kb upstream 10.0kb upstream 10000 false chr7: 25563897-25573896 Medicago truncatula
Medtr7g069430 10.0kb downstream 10.0kb downstream 13592 true chr7: 25550305-25563896 Medicago truncatula
Medtr7g069430 10.0kb downstream 10.0kb downstream 10000 false chr7: 25550305-25560304 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301161 5265 Fabidae View MSA
124066566 5270 Rosid View MSA
123743226 5271 Pentapetalae View MSA
122791953 5272 Eudicot View MSA
122044943 5273 Angiosperm View MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.523       Low
cufflinks 3.314        
cufflinks 3.845        
cufflinks 4.207        
cufflinks 7.284       High
cufflinks 1.743       Low
cufflinks 4.274        
cufflinks 4.499        
cufflinks 4.922        

0 Strain