Gene : Medtr7g011790 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31558:SF1 - F7A19.6 PROTEIN-RELATED Description:  DUF1336 family protein
Genomic Order:  395 Name:  ? Medtr7g011790
Secondary Identifier:  ? PAC:31084222
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g011790 0.5kb upstream 0.5kb upstream 7665 true chr7: 3238094-3245758 Medicago truncatula
Medtr7g011790 0.5kb upstream 0.5kb upstream 500 false chr7: 3238094-3238593 Medicago truncatula
Medtr7g011790 0.5kb downstream 0.5kb downstream 7665 true chr7: 3238594-3246258 Medicago truncatula
Medtr7g011790 0.5kb downstream 0.5kb downstream 500 false chr7: 3245759-3246258 Medicago truncatula
Medtr7g011790 1.0kb upstream 1.0kb upstream 8165 true chr7: 3237594-3245758 Medicago truncatula
Medtr7g011790 1.0kb upstream 1.0kb upstream 1000 false chr7: 3237594-3238593 Medicago truncatula
Medtr7g011790 1.0kb downstream 1.0kb downstream 8165 true chr7: 3238594-3246758 Medicago truncatula
Medtr7g011790 1.0kb downstream 1.0kb downstream 1000 false chr7: 3245759-3246758 Medicago truncatula
Medtr7g011790 2.0kb upstream 2.0kb upstream 9165 true chr7: 3236594-3245758 Medicago truncatula
Medtr7g011790 2.0kb upstream 2.0kb upstream 2000 false chr7: 3236594-3238593 Medicago truncatula
Medtr7g011790 2.0kb downstream 2.0kb downstream 9165 true chr7: 3238594-3247758 Medicago truncatula
Medtr7g011790 2.0kb downstream 2.0kb downstream 2000 false chr7: 3245759-3247758 Medicago truncatula
Medtr7g011790 5.0kb upstream 5.0kb upstream 12165 true chr7: 3233594-3245758 Medicago truncatula
Medtr7g011790 5.0kb upstream 5.0kb upstream 5000 false chr7: 3233594-3238593 Medicago truncatula
Medtr7g011790 5.0kb downstream 5.0kb downstream 12165 true chr7: 3238594-3250758 Medicago truncatula
Medtr7g011790 5.0kb downstream 5.0kb downstream 5000 false chr7: 3245759-3250758 Medicago truncatula
Medtr7g011790 10.0kb upstream 10.0kb upstream 17165 true chr7: 3228594-3245758 Medicago truncatula
Medtr7g011790 10.0kb upstream 10.0kb upstream 10000 false chr7: 3228594-3238593 Medicago truncatula
Medtr7g011790 10.0kb downstream 10.0kb downstream 17165 true chr7: 3238594-3255758 Medicago truncatula
Medtr7g011790 10.0kb downstream 10.0kb downstream 10000 false chr7: 3245759-3255758 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301164 5265 Fabidae View MSA
124073265 5270 Rosid View MSA
123751293 5271 Pentapetalae View MSA
122789069 5272 Eudicot View MSA
122042640 5273 Angiosperm View MSA
121348788 5274 Embryophyte View MSA
123427527 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.344       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.001     Low  
cufflinks 0.017     Low  

0 Strain