Gene : Medtr7g092740 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR27000:SF136 - POLYGALACTURONASE INHIBITOR 1-RELATED Description:  polygalacturonase inhibitor
Genomic Order:  4456 Name:  ? Medtr7g092740
Secondary Identifier:  ? PAC:31076953
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g092740 0.5kb upstream 0.5kb upstream 1973 true chr7: 36787571-36789543 Medicago truncatula
Medtr7g092740 0.5kb upstream 0.5kb upstream 500 false chr7: 36789044-36789543 Medicago truncatula
Medtr7g092740 0.5kb downstream 0.5kb downstream 1973 true chr7: 36787071-36789043 Medicago truncatula
Medtr7g092740 0.5kb downstream 0.5kb downstream 500 false chr7: 36787071-36787570 Medicago truncatula
Medtr7g092740 1.0kb upstream 1.0kb upstream 2473 true chr7: 36787571-36790043 Medicago truncatula
Medtr7g092740 1.0kb upstream 1.0kb upstream 1000 false chr7: 36789044-36790043 Medicago truncatula
Medtr7g092740 1.0kb downstream 1.0kb downstream 2473 true chr7: 36786571-36789043 Medicago truncatula
Medtr7g092740 1.0kb downstream 1.0kb downstream 1000 false chr7: 36786571-36787570 Medicago truncatula
Medtr7g092740 2.0kb upstream 2.0kb upstream 3473 true chr7: 36787571-36791043 Medicago truncatula
Medtr7g092740 2.0kb upstream 2.0kb upstream 2000 false chr7: 36789044-36791043 Medicago truncatula
Medtr7g092740 2.0kb downstream 2.0kb downstream 3473 true chr7: 36785571-36789043 Medicago truncatula
Medtr7g092740 2.0kb downstream 2.0kb downstream 2000 false chr7: 36785571-36787570 Medicago truncatula
Medtr7g092740 5.0kb upstream 5.0kb upstream 6473 true chr7: 36787571-36794043 Medicago truncatula
Medtr7g092740 5.0kb upstream 5.0kb upstream 5000 false chr7: 36789044-36794043 Medicago truncatula
Medtr7g092740 5.0kb downstream 5.0kb downstream 6473 true chr7: 36782571-36789043 Medicago truncatula
Medtr7g092740 5.0kb downstream 5.0kb downstream 5000 false chr7: 36782571-36787570 Medicago truncatula
Medtr7g092740 10.0kb upstream 10.0kb upstream 11473 true chr7: 36787571-36799043 Medicago truncatula
Medtr7g092740 10.0kb upstream 10.0kb upstream 10000 false chr7: 36789044-36799043 Medicago truncatula
Medtr7g092740 10.0kb downstream 10.0kb downstream 11473 true chr7: 36777571-36789043 Medicago truncatula
Medtr7g092740 10.0kb downstream 10.0kb downstream 10000 false chr7: 36777571-36787570 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305065 5265 Fabidae View MSA
124063977 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.366        
cufflinks 13.697     High  
cufflinks 8.965        
cufflinks 6.548        
cufflinks 15.071     High High
cufflinks 1.677       Low
cufflinks 4.016        
cufflinks 11.639     High  
cufflinks 10.358     High  

0 Strain