Gene : Medtr7g092200 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10887:SF366 - DNA-BINDING PROTEIN-RELATED Description:  DNA-binding protein SMUBP-2
Genomic Order:  4418 Name:  ? Medtr7g092200
Secondary Identifier:  ? PAC:31084217
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g092200 0.5kb upstream 0.5kb upstream 7838 true chr7: 36511162-36518999 Medicago truncatula
Medtr7g092200 0.5kb upstream 0.5kb upstream 500 false chr7: 36518500-36518999 Medicago truncatula
Medtr7g092200 0.5kb downstream 0.5kb downstream 7838 true chr7: 36510662-36518499 Medicago truncatula
Medtr7g092200 0.5kb downstream 0.5kb downstream 500 false chr7: 36510662-36511161 Medicago truncatula
Medtr7g092200 1.0kb upstream 1.0kb upstream 8338 true chr7: 36511162-36519499 Medicago truncatula
Medtr7g092200 1.0kb upstream 1.0kb upstream 1000 false chr7: 36518500-36519499 Medicago truncatula
Medtr7g092200 1.0kb downstream 1.0kb downstream 8338 true chr7: 36510162-36518499 Medicago truncatula
Medtr7g092200 1.0kb downstream 1.0kb downstream 1000 false chr7: 36510162-36511161 Medicago truncatula
Medtr7g092200 2.0kb upstream 2.0kb upstream 9338 true chr7: 36511162-36520499 Medicago truncatula
Medtr7g092200 2.0kb upstream 2.0kb upstream 2000 false chr7: 36518500-36520499 Medicago truncatula
Medtr7g092200 2.0kb downstream 2.0kb downstream 9338 true chr7: 36509162-36518499 Medicago truncatula
Medtr7g092200 2.0kb downstream 2.0kb downstream 2000 false chr7: 36509162-36511161 Medicago truncatula
Medtr7g092200 5.0kb upstream 5.0kb upstream 12338 true chr7: 36511162-36523499 Medicago truncatula
Medtr7g092200 5.0kb upstream 5.0kb upstream 5000 false chr7: 36518500-36523499 Medicago truncatula
Medtr7g092200 5.0kb downstream 5.0kb downstream 12338 true chr7: 36506162-36518499 Medicago truncatula
Medtr7g092200 5.0kb downstream 5.0kb downstream 5000 false chr7: 36506162-36511161 Medicago truncatula
Medtr7g092200 10.0kb upstream 10.0kb upstream 17338 true chr7: 36511162-36528499 Medicago truncatula
Medtr7g092200 10.0kb upstream 10.0kb upstream 10000 false chr7: 36518500-36528499 Medicago truncatula
Medtr7g092200 10.0kb downstream 10.0kb downstream 17338 true chr7: 36501162-36518499 Medicago truncatula
Medtr7g092200 10.0kb downstream 10.0kb downstream 10000 false chr7: 36501162-36511161 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305192 5265 Fabidae View MSA
124062749 5270 Rosid View MSA
123737658 5271 Pentapetalae View MSA
122787636 5272 Eudicot View MSA
122044580 5273 Angiosperm View MSA
123429092 5275 Viridiplantae View MSA
121344995 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.933       High
cufflinks 1.188        
cufflinks 1.869        
cufflinks 0.389       Low
cufflinks 1.518        
cufflinks 0.46       Low
cufflinks 1.439        
cufflinks 1.3        
cufflinks 1.598        

0 Strain