Gene : Medtr5g080700 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  4459
Name:  ? Medtr5g080700 Secondary Identifier:  ? PAC:31087105
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g080700 0.5kb upstream 0.5kb upstream 2956 true chr5: 34549137-34552092 Medicago truncatula
Medtr5g080700 0.5kb upstream 0.5kb upstream 500 false chr5: 34551593-34552092 Medicago truncatula
Medtr5g080700 0.5kb downstream 0.5kb downstream 2956 true chr5: 34548637-34551592 Medicago truncatula
Medtr5g080700 0.5kb downstream 0.5kb downstream 500 false chr5: 34548637-34549136 Medicago truncatula
Medtr5g080700 1.0kb upstream 1.0kb upstream 3456 true chr5: 34549137-34552592 Medicago truncatula
Medtr5g080700 1.0kb upstream 1.0kb upstream 1000 false chr5: 34551593-34552592 Medicago truncatula
Medtr5g080700 1.0kb downstream 1.0kb downstream 3456 true chr5: 34548137-34551592 Medicago truncatula
Medtr5g080700 1.0kb downstream 1.0kb downstream 1000 false chr5: 34548137-34549136 Medicago truncatula
Medtr5g080700 2.0kb upstream 2.0kb upstream 4456 true chr5: 34549137-34553592 Medicago truncatula
Medtr5g080700 2.0kb upstream 2.0kb upstream 2000 false chr5: 34551593-34553592 Medicago truncatula
Medtr5g080700 2.0kb downstream 2.0kb downstream 4456 true chr5: 34547137-34551592 Medicago truncatula
Medtr5g080700 2.0kb downstream 2.0kb downstream 2000 false chr5: 34547137-34549136 Medicago truncatula
Medtr5g080700 5.0kb upstream 5.0kb upstream 7456 true chr5: 34549137-34556592 Medicago truncatula
Medtr5g080700 5.0kb upstream 5.0kb upstream 5000 false chr5: 34551593-34556592 Medicago truncatula
Medtr5g080700 5.0kb downstream 5.0kb downstream 7456 true chr5: 34544137-34551592 Medicago truncatula
Medtr5g080700 5.0kb downstream 5.0kb downstream 5000 false chr5: 34544137-34549136 Medicago truncatula
Medtr5g080700 10.0kb upstream 10.0kb upstream 12456 true chr5: 34549137-34561592 Medicago truncatula
Medtr5g080700 10.0kb upstream 10.0kb upstream 10000 false chr5: 34551593-34561592 Medicago truncatula
Medtr5g080700 10.0kb downstream 10.0kb downstream 12456 true chr5: 34539137-34551592 Medicago truncatula
Medtr5g080700 10.0kb downstream 10.0kb downstream 10000 false chr5: 34539137-34549136 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041497 5273 Angiosperm View MSA
122299135 5265 Fabidae View MSA
124073202 5270 Rosid View MSA
123736728 5271 Pentapetalae View MSA
122793872 5272 Eudicot View MSA
121344017 5274 Embryophyte View MSA
123379960 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.929        
cufflinks 4.959        
cufflinks 6.643       High
cufflinks 1.197        
cufflinks 8.839       High
cufflinks 0.62       Low
cufflinks 1.37        
cufflinks 5.231        
cufflinks 1.261        

0 Strain