Gene : Medtr5g024020 M. truncatula Mt4.0v1
Defline:  (1 of 27) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Description:  seed linoleate 9S-lipoxygenase
Genomic Order:  1390 Name:  ? Medtr5g024020
Secondary Identifier:  ? PAC:31085005
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g024020 0.5kb upstream 0.5kb upstream 7052 true chr5: 9599982-9607033 Medicago truncatula
Medtr5g024020 0.5kb upstream 0.5kb upstream 500 false chr5: 9599982-9600481 Medicago truncatula
Medtr5g024020 0.5kb downstream 0.5kb downstream 7052 true chr5: 9600482-9607533 Medicago truncatula
Medtr5g024020 0.5kb downstream 0.5kb downstream 500 false chr5: 9607034-9607533 Medicago truncatula
Medtr5g024020 1.0kb upstream 1.0kb upstream 7552 true chr5: 9599482-9607033 Medicago truncatula
Medtr5g024020 1.0kb upstream 1.0kb upstream 1000 false chr5: 9599482-9600481 Medicago truncatula
Medtr5g024020 1.0kb downstream 1.0kb downstream 7552 true chr5: 9600482-9608033 Medicago truncatula
Medtr5g024020 1.0kb downstream 1.0kb downstream 1000 false chr5: 9607034-9608033 Medicago truncatula
Medtr5g024020 2.0kb upstream 2.0kb upstream 8552 true chr5: 9598482-9607033 Medicago truncatula
Medtr5g024020 2.0kb upstream 2.0kb upstream 2000 false chr5: 9598482-9600481 Medicago truncatula
Medtr5g024020 2.0kb downstream 2.0kb downstream 8552 true chr5: 9600482-9609033 Medicago truncatula
Medtr5g024020 2.0kb downstream 2.0kb downstream 2000 false chr5: 9607034-9609033 Medicago truncatula
Medtr5g024020 5.0kb upstream 5.0kb upstream 11552 true chr5: 9595482-9607033 Medicago truncatula
Medtr5g024020 5.0kb upstream 5.0kb upstream 5000 false chr5: 9595482-9600481 Medicago truncatula
Medtr5g024020 5.0kb downstream 5.0kb downstream 11552 true chr5: 9600482-9612033 Medicago truncatula
Medtr5g024020 5.0kb downstream 5.0kb downstream 5000 false chr5: 9607034-9612033 Medicago truncatula
Medtr5g024020 10.0kb upstream 10.0kb upstream 16552 true chr5: 9590482-9607033 Medicago truncatula
Medtr5g024020 10.0kb upstream 10.0kb upstream 10000 false chr5: 9590482-9600481 Medicago truncatula
Medtr5g024020 10.0kb downstream 10.0kb downstream 16552 true chr5: 9600482-9617033 Medicago truncatula
Medtr5g024020 10.0kb downstream 10.0kb downstream 10000 false chr5: 9607034-9617033 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656089 5273 Angiosperm View MSA
122297347 5265 Fabidae View MSA
124035999 5270 Rosid View MSA
123609425 5271 Pentapetalae View MSA
122644073 5272 Eudicot View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.743     High  
cufflinks 0.005     Low Low
cufflinks 0.005     Low Low
cufflinks 42.973     High  
cufflinks 0.02     Low  
cufflinks 75.968     High  
cufflinks 149.001     High  
cufflinks 0.002     Low Low
cufflinks 140.311     High  

0 Strain