Gene : Medtr4g131330 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24220:SF508 - ABC TRANSPORTER I FAMILY MEMBER 1 Description:  heme ABC exporter, ATP-binding protein CcmA
Genomic Order:  7042 Name:  ? Medtr4g131330
Secondary Identifier:  ? PAC:31106941
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g131330 0.5kb upstream 0.5kb upstream 1190 true chr4: 54783716-54784905 Medicago truncatula
Medtr4g131330 0.5kb upstream 0.5kb upstream 500 false chr4: 54784406-54784905 Medicago truncatula
Medtr4g131330 0.5kb downstream 0.5kb downstream 1190 true chr4: 54783216-54784405 Medicago truncatula
Medtr4g131330 0.5kb downstream 0.5kb downstream 500 false chr4: 54783216-54783715 Medicago truncatula
Medtr4g131330 1.0kb upstream 1.0kb upstream 1690 true chr4: 54783716-54785405 Medicago truncatula
Medtr4g131330 1.0kb upstream 1.0kb upstream 1000 false chr4: 54784406-54785405 Medicago truncatula
Medtr4g131330 1.0kb downstream 1.0kb downstream 1690 true chr4: 54782716-54784405 Medicago truncatula
Medtr4g131330 1.0kb downstream 1.0kb downstream 1000 false chr4: 54782716-54783715 Medicago truncatula
Medtr4g131330 2.0kb upstream 2.0kb upstream 2690 true chr4: 54783716-54786405 Medicago truncatula
Medtr4g131330 2.0kb upstream 2.0kb upstream 2000 false chr4: 54784406-54786405 Medicago truncatula
Medtr4g131330 2.0kb downstream 2.0kb downstream 2690 true chr4: 54781716-54784405 Medicago truncatula
Medtr4g131330 2.0kb downstream 2.0kb downstream 2000 false chr4: 54781716-54783715 Medicago truncatula
Medtr4g131330 5.0kb upstream 5.0kb upstream 5690 true chr4: 54783716-54789405 Medicago truncatula
Medtr4g131330 5.0kb upstream 5.0kb upstream 5000 false chr4: 54784406-54789405 Medicago truncatula
Medtr4g131330 5.0kb downstream 5.0kb downstream 5690 true chr4: 54778716-54784405 Medicago truncatula
Medtr4g131330 5.0kb downstream 5.0kb downstream 5000 false chr4: 54778716-54783715 Medicago truncatula
Medtr4g131330 10.0kb upstream 10.0kb upstream 10690 true chr4: 54783716-54794405 Medicago truncatula
Medtr4g131330 10.0kb upstream 10.0kb upstream 10000 false chr4: 54784406-54794405 Medicago truncatula
Medtr4g131330 10.0kb downstream 10.0kb downstream 10690 true chr4: 54773716-54784405 Medicago truncatula
Medtr4g131330 10.0kb downstream 10.0kb downstream 10000 false chr4: 54773716-54783715 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040954 5273 Angiosperm View MSA
122305077 5265 Fabidae View MSA
124062364 5270 Rosid View MSA
123737247 5271 Pentapetalae View MSA
122788728 5272 Eudicot View MSA
121344405 5274 Embryophyte View MSA
123380037 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.042     High High
cufflinks 6.865        
cufflinks 9.504        
cufflinks 14.305     High High
cufflinks 6.725        
cufflinks 6.148       Low
cufflinks 10.311     High  
cufflinks 7.004        
cufflinks 13.167     High High

0 Strain