Gene : Medtr5g013865 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11387:SF15 - CYTOCHROME C OXIDASE SUBUNIT 6B-1 Description:  cytochrome C oxidase, subunit VIb family protein
Genomic Order:  703 Name:  ? Medtr5g013865
Secondary Identifier:  ? PAC:31086989
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3781 Medicago truncatula pathologic  
Mtruncatula PWY-7279 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g013865 0.5kb upstream 0.5kb upstream 2115 true chr5: 4573623-4575737 Medicago truncatula
Medtr5g013865 0.5kb upstream 0.5kb upstream 500 false chr5: 4575238-4575737 Medicago truncatula
Medtr5g013865 0.5kb downstream 0.5kb downstream 2115 true chr5: 4573123-4575237 Medicago truncatula
Medtr5g013865 0.5kb downstream 0.5kb downstream 500 false chr5: 4573123-4573622 Medicago truncatula
Medtr5g013865 1.0kb upstream 1.0kb upstream 2615 true chr5: 4573623-4576237 Medicago truncatula
Medtr5g013865 1.0kb upstream 1.0kb upstream 1000 false chr5: 4575238-4576237 Medicago truncatula
Medtr5g013865 1.0kb downstream 1.0kb downstream 2615 true chr5: 4572623-4575237 Medicago truncatula
Medtr5g013865 1.0kb downstream 1.0kb downstream 1000 false chr5: 4572623-4573622 Medicago truncatula
Medtr5g013865 2.0kb upstream 2.0kb upstream 3615 true chr5: 4573623-4577237 Medicago truncatula
Medtr5g013865 2.0kb upstream 2.0kb upstream 2000 false chr5: 4575238-4577237 Medicago truncatula
Medtr5g013865 2.0kb downstream 2.0kb downstream 3615 true chr5: 4571623-4575237 Medicago truncatula
Medtr5g013865 2.0kb downstream 2.0kb downstream 2000 false chr5: 4571623-4573622 Medicago truncatula
Medtr5g013865 5.0kb upstream 5.0kb upstream 6615 true chr5: 4573623-4580237 Medicago truncatula
Medtr5g013865 5.0kb upstream 5.0kb upstream 5000 false chr5: 4575238-4580237 Medicago truncatula
Medtr5g013865 5.0kb downstream 5.0kb downstream 6615 true chr5: 4568623-4575237 Medicago truncatula
Medtr5g013865 5.0kb downstream 5.0kb downstream 5000 false chr5: 4568623-4573622 Medicago truncatula
Medtr5g013865 10.0kb upstream 10.0kb upstream 11615 true chr5: 4573623-4585237 Medicago truncatula
Medtr5g013865 10.0kb upstream 10.0kb upstream 10000 false chr5: 4575238-4585237 Medicago truncatula
Medtr5g013865 10.0kb downstream 10.0kb downstream 11615 true chr5: 4563623-4575237 Medicago truncatula
Medtr5g013865 10.0kb downstream 10.0kb downstream 10000 false chr5: 4563623-4573622 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304521 5265 Fabidae View MSA
124072730 5270 Rosid View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain