Gene : Medtr4g099100 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12439 - PLACENTAL PROTEIN 11-RELATED Description:  poly(U)-specific endoribonuclease-B-like protein
Genomic Order:  5177 Name:  ? Medtr4g099100
Secondary Identifier:  ? PAC:31108503
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g099100 0.5kb upstream 0.5kb upstream 5892 true chr4: 41027238-41033129 Medicago truncatula
Medtr4g099100 0.5kb upstream 0.5kb upstream 500 false chr4: 41027238-41027737 Medicago truncatula
Medtr4g099100 0.5kb downstream 0.5kb downstream 5892 true chr4: 41027738-41033629 Medicago truncatula
Medtr4g099100 0.5kb downstream 0.5kb downstream 500 false chr4: 41033130-41033629 Medicago truncatula
Medtr4g099100 1.0kb upstream 1.0kb upstream 6392 true chr4: 41026738-41033129 Medicago truncatula
Medtr4g099100 1.0kb upstream 1.0kb upstream 1000 false chr4: 41026738-41027737 Medicago truncatula
Medtr4g099100 1.0kb downstream 1.0kb downstream 6392 true chr4: 41027738-41034129 Medicago truncatula
Medtr4g099100 1.0kb downstream 1.0kb downstream 1000 false chr4: 41033130-41034129 Medicago truncatula
Medtr4g099100 2.0kb upstream 2.0kb upstream 7392 true chr4: 41025738-41033129 Medicago truncatula
Medtr4g099100 2.0kb upstream 2.0kb upstream 2000 false chr4: 41025738-41027737 Medicago truncatula
Medtr4g099100 2.0kb downstream 2.0kb downstream 7392 true chr4: 41027738-41035129 Medicago truncatula
Medtr4g099100 2.0kb downstream 2.0kb downstream 2000 false chr4: 41033130-41035129 Medicago truncatula
Medtr4g099100 5.0kb upstream 5.0kb upstream 10392 true chr4: 41022738-41033129 Medicago truncatula
Medtr4g099100 5.0kb upstream 5.0kb upstream 5000 false chr4: 41022738-41027737 Medicago truncatula
Medtr4g099100 5.0kb downstream 5.0kb downstream 10392 true chr4: 41027738-41038129 Medicago truncatula
Medtr4g099100 5.0kb downstream 5.0kb downstream 5000 false chr4: 41033130-41038129 Medicago truncatula
Medtr4g099100 10.0kb upstream 10.0kb upstream 15392 true chr4: 41017738-41033129 Medicago truncatula
Medtr4g099100 10.0kb upstream 10.0kb upstream 10000 false chr4: 41017738-41027737 Medicago truncatula
Medtr4g099100 10.0kb downstream 10.0kb downstream 15392 true chr4: 41027738-41043129 Medicago truncatula
Medtr4g099100 10.0kb downstream 10.0kb downstream 10000 false chr4: 41033130-41043129 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303637 5265 Fabidae View MSA
124066803 5270 Rosid View MSA
123737202 5271 Pentapetalae View MSA
122787847 5272 Eudicot View MSA
122046108 5273 Angiosperm View MSA
121347473 5274 Embryophyte View MSA
123426301 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.89        
cufflinks 2.389        
cufflinks 2.741        
cufflinks 2.05        
cufflinks 2.774        
cufflinks 1.158       Low
cufflinks 3.97       High
cufflinks 2.296        
cufflinks 3.57        

0 Strain