Gene : Medtr4g088210 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31384:SF5 - AUXIN RESPONSE FACTOR 3 Description:  auxin response factor 3
Genomic Order:  4377 Name:  ? Medtr4g088210
Secondary Identifier:  ? PAC:31112870
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g088210 0.5kb upstream 0.5kb upstream 5460 true chr4: 34795652-34801111 Medicago truncatula
Medtr4g088210 0.5kb upstream 0.5kb upstream 500 false chr4: 34795652-34796151 Medicago truncatula
Medtr4g088210 0.5kb downstream 0.5kb downstream 5460 true chr4: 34796152-34801611 Medicago truncatula
Medtr4g088210 0.5kb downstream 0.5kb downstream 500 false chr4: 34801112-34801611 Medicago truncatula
Medtr4g088210 1.0kb upstream 1.0kb upstream 5960 true chr4: 34795152-34801111 Medicago truncatula
Medtr4g088210 1.0kb upstream 1.0kb upstream 1000 false chr4: 34795152-34796151 Medicago truncatula
Medtr4g088210 1.0kb downstream 1.0kb downstream 5960 true chr4: 34796152-34802111 Medicago truncatula
Medtr4g088210 1.0kb downstream 1.0kb downstream 1000 false chr4: 34801112-34802111 Medicago truncatula
Medtr4g088210 2.0kb upstream 2.0kb upstream 6960 true chr4: 34794152-34801111 Medicago truncatula
Medtr4g088210 2.0kb upstream 2.0kb upstream 2000 false chr4: 34794152-34796151 Medicago truncatula
Medtr4g088210 2.0kb downstream 2.0kb downstream 6960 true chr4: 34796152-34803111 Medicago truncatula
Medtr4g088210 2.0kb downstream 2.0kb downstream 2000 false chr4: 34801112-34803111 Medicago truncatula
Medtr4g088210 5.0kb upstream 5.0kb upstream 9960 true chr4: 34791152-34801111 Medicago truncatula
Medtr4g088210 5.0kb upstream 5.0kb upstream 5000 false chr4: 34791152-34796151 Medicago truncatula
Medtr4g088210 5.0kb downstream 5.0kb downstream 9960 true chr4: 34796152-34806111 Medicago truncatula
Medtr4g088210 5.0kb downstream 5.0kb downstream 5000 false chr4: 34801112-34806111 Medicago truncatula
Medtr4g088210 10.0kb upstream 10.0kb upstream 14960 true chr4: 34786152-34801111 Medicago truncatula
Medtr4g088210 10.0kb upstream 10.0kb upstream 10000 false chr4: 34786152-34796151 Medicago truncatula
Medtr4g088210 10.0kb downstream 10.0kb downstream 14960 true chr4: 34796152-34811111 Medicago truncatula
Medtr4g088210 10.0kb downstream 10.0kb downstream 10000 false chr4: 34801112-34811111 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309697 5265 Fabidae View MSA
124066070 5270 Rosid View MSA
123743796 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.127       Low
cufflinks 0.947        
cufflinks 0.86        
cufflinks 0.348        
cufflinks 0.866        
cufflinks 0.151       Low
cufflinks 0.714        
cufflinks 0.885        
cufflinks 0.862        

0 Strain