Gene : Medtr4g115350 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12979:SF5 - CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10 Description:  CCR4-NOT transcription complex subunit-like protein
Genomic Order:  6049 Name:  ? Medtr4g115350
Secondary Identifier:  ? PAC:31107853
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g115350 0.5kb upstream 0.5kb upstream 8040 true chr4: 47633707-47641746 Medicago truncatula
Medtr4g115350 0.5kb upstream 0.5kb upstream 500 false chr4: 47633707-47634206 Medicago truncatula
Medtr4g115350 0.5kb downstream 0.5kb downstream 8040 true chr4: 47634207-47642246 Medicago truncatula
Medtr4g115350 0.5kb downstream 0.5kb downstream 500 false chr4: 47641747-47642246 Medicago truncatula
Medtr4g115350 1.0kb upstream 1.0kb upstream 8540 true chr4: 47633207-47641746 Medicago truncatula
Medtr4g115350 1.0kb upstream 1.0kb upstream 1000 false chr4: 47633207-47634206 Medicago truncatula
Medtr4g115350 1.0kb downstream 1.0kb downstream 8540 true chr4: 47634207-47642746 Medicago truncatula
Medtr4g115350 1.0kb downstream 1.0kb downstream 1000 false chr4: 47641747-47642746 Medicago truncatula
Medtr4g115350 2.0kb upstream 2.0kb upstream 9540 true chr4: 47632207-47641746 Medicago truncatula
Medtr4g115350 2.0kb upstream 2.0kb upstream 2000 false chr4: 47632207-47634206 Medicago truncatula
Medtr4g115350 2.0kb downstream 2.0kb downstream 9540 true chr4: 47634207-47643746 Medicago truncatula
Medtr4g115350 2.0kb downstream 2.0kb downstream 2000 false chr4: 47641747-47643746 Medicago truncatula
Medtr4g115350 5.0kb upstream 5.0kb upstream 12540 true chr4: 47629207-47641746 Medicago truncatula
Medtr4g115350 5.0kb upstream 5.0kb upstream 5000 false chr4: 47629207-47634206 Medicago truncatula
Medtr4g115350 5.0kb downstream 5.0kb downstream 12540 true chr4: 47634207-47646746 Medicago truncatula
Medtr4g115350 5.0kb downstream 5.0kb downstream 5000 false chr4: 47641747-47646746 Medicago truncatula
Medtr4g115350 10.0kb upstream 10.0kb upstream 17540 true chr4: 47624207-47641746 Medicago truncatula
Medtr4g115350 10.0kb upstream 10.0kb upstream 10000 false chr4: 47624207-47634206 Medicago truncatula
Medtr4g115350 10.0kb downstream 10.0kb downstream 17540 true chr4: 47634207-47651746 Medicago truncatula
Medtr4g115350 10.0kb downstream 10.0kb downstream 10000 false chr4: 47641747-47651746 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041333 5273 Angiosperm View MSA
122303335 5265 Fabidae View MSA
124066173 5270 Rosid View MSA
123737593 5271 Pentapetalae View MSA
122791315 5272 Eudicot View MSA
121344566 5274 Embryophyte View MSA
123426128 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.948        
cufflinks 3.305        
cufflinks 3.306        
cufflinks 1.871       Low
cufflinks 4.11       High
cufflinks 1.265       Low
cufflinks 2.468        
cufflinks 3.109        
cufflinks 3.591        

0 Strain