Gene : Medtr4g080030 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23257:SF545 - SERINE/THREONINE KINASE-RELATED Description:  MAP kinase kinase kinase-like protein
Genomic Order:  3868 Name:  ? Medtr4g080030
Secondary Identifier:  ? PAC:31113896
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g080030 0.5kb upstream 0.5kb upstream 13977 true chr4: 30978168-30992144 Medicago truncatula
Medtr4g080030 0.5kb upstream 0.5kb upstream 500 false chr4: 30991645-30992144 Medicago truncatula
Medtr4g080030 0.5kb downstream 0.5kb downstream 13977 true chr4: 30977668-30991644 Medicago truncatula
Medtr4g080030 0.5kb downstream 0.5kb downstream 500 false chr4: 30977668-30978167 Medicago truncatula
Medtr4g080030 1.0kb upstream 1.0kb upstream 14477 true chr4: 30978168-30992644 Medicago truncatula
Medtr4g080030 1.0kb upstream 1.0kb upstream 1000 false chr4: 30991645-30992644 Medicago truncatula
Medtr4g080030 1.0kb downstream 1.0kb downstream 14477 true chr4: 30977168-30991644 Medicago truncatula
Medtr4g080030 1.0kb downstream 1.0kb downstream 1000 false chr4: 30977168-30978167 Medicago truncatula
Medtr4g080030 2.0kb upstream 2.0kb upstream 15477 true chr4: 30978168-30993644 Medicago truncatula
Medtr4g080030 2.0kb upstream 2.0kb upstream 2000 false chr4: 30991645-30993644 Medicago truncatula
Medtr4g080030 2.0kb downstream 2.0kb downstream 15477 true chr4: 30976168-30991644 Medicago truncatula
Medtr4g080030 2.0kb downstream 2.0kb downstream 2000 false chr4: 30976168-30978167 Medicago truncatula
Medtr4g080030 5.0kb upstream 5.0kb upstream 18477 true chr4: 30978168-30996644 Medicago truncatula
Medtr4g080030 5.0kb upstream 5.0kb upstream 5000 false chr4: 30991645-30996644 Medicago truncatula
Medtr4g080030 5.0kb downstream 5.0kb downstream 18477 true chr4: 30973168-30991644 Medicago truncatula
Medtr4g080030 5.0kb downstream 5.0kb downstream 5000 false chr4: 30973168-30978167 Medicago truncatula
Medtr4g080030 10.0kb upstream 10.0kb upstream 23477 true chr4: 30978168-31001644 Medicago truncatula
Medtr4g080030 10.0kb upstream 10.0kb upstream 10000 false chr4: 30991645-31001644 Medicago truncatula
Medtr4g080030 10.0kb downstream 10.0kb downstream 23477 true chr4: 30968168-30991644 Medicago truncatula
Medtr4g080030 10.0kb downstream 10.0kb downstream 10000 false chr4: 30968168-30978167 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296617 5265 Fabidae View MSA
124067282 5270 Rosid View MSA
123743049 5271 Pentapetalae View MSA
122789861 5272 Eudicot View MSA
122048343 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351351 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.416        
cufflinks 3.262       High
cufflinks 2.212        
cufflinks 0.976       Low
cufflinks 1.64        
cufflinks 1.402        
cufflinks 2.547        
cufflinks 1.846        
cufflinks 3.667       High

0 Strain