Gene : Medtr4g078780 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10943 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT Description:  26S proteasome regulatory subunit S2 1B
Genomic Order:  3791 Name:  ? Medtr4g078780
Secondary Identifier:  ? PAC:31111944
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g078780 0.5kb upstream 0.5kb upstream 9915 true chr4: 30442697-30452611 Medicago truncatula
Medtr4g078780 0.5kb upstream 0.5kb upstream 500 false chr4: 30452112-30452611 Medicago truncatula
Medtr4g078780 0.5kb downstream 0.5kb downstream 9915 true chr4: 30442197-30452111 Medicago truncatula
Medtr4g078780 0.5kb downstream 0.5kb downstream 500 false chr4: 30442197-30442696 Medicago truncatula
Medtr4g078780 1.0kb upstream 1.0kb upstream 10415 true chr4: 30442697-30453111 Medicago truncatula
Medtr4g078780 1.0kb upstream 1.0kb upstream 1000 false chr4: 30452112-30453111 Medicago truncatula
Medtr4g078780 1.0kb downstream 1.0kb downstream 10415 true chr4: 30441697-30452111 Medicago truncatula
Medtr4g078780 1.0kb downstream 1.0kb downstream 1000 false chr4: 30441697-30442696 Medicago truncatula
Medtr4g078780 2.0kb upstream 2.0kb upstream 11415 true chr4: 30442697-30454111 Medicago truncatula
Medtr4g078780 2.0kb upstream 2.0kb upstream 2000 false chr4: 30452112-30454111 Medicago truncatula
Medtr4g078780 2.0kb downstream 2.0kb downstream 11415 true chr4: 30440697-30452111 Medicago truncatula
Medtr4g078780 2.0kb downstream 2.0kb downstream 2000 false chr4: 30440697-30442696 Medicago truncatula
Medtr4g078780 5.0kb upstream 5.0kb upstream 14415 true chr4: 30442697-30457111 Medicago truncatula
Medtr4g078780 5.0kb upstream 5.0kb upstream 5000 false chr4: 30452112-30457111 Medicago truncatula
Medtr4g078780 5.0kb downstream 5.0kb downstream 14415 true chr4: 30437697-30452111 Medicago truncatula
Medtr4g078780 5.0kb downstream 5.0kb downstream 5000 false chr4: 30437697-30442696 Medicago truncatula
Medtr4g078780 10.0kb upstream 10.0kb upstream 19415 true chr4: 30442697-30462111 Medicago truncatula
Medtr4g078780 10.0kb upstream 10.0kb upstream 10000 false chr4: 30452112-30462111 Medicago truncatula
Medtr4g078780 10.0kb downstream 10.0kb downstream 19415 true chr4: 30432697-30452111 Medicago truncatula
Medtr4g078780 10.0kb downstream 10.0kb downstream 10000 false chr4: 30432697-30442696 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310505 5265 Fabidae View MSA
124062825 5270 Rosid View MSA
123743224 5271 Pentapetalae View MSA
122786983 5272 Eudicot View MSA
122042231 5273 Angiosperm View MSA
123428994 5275 Viridiplantae View MSA
121346933 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.382        
cufflinks 7.838        
cufflinks 6.811        
cufflinks 4.395        
cufflinks 8.142        
cufflinks 2.12       Low
cufflinks 5.856        
cufflinks 7.284        
cufflinks 8.637        

0 Strain