Gene : Medtr4g046757 M. truncatula Mt4.0v1
Defline:  (1 of 1) 4.1.3.1 - Isocitrate lyase / Isocitritase Description:  isocitrate lyase
Genomic Order:  1962 Name:  ? Medtr4g046757
Secondary Identifier:  ? PAC:31110728
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLYOXYLATE-BYPASS Medicago truncatula pathologic  
Mtruncatula PWY-561 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g046757 0.5kb upstream 0.5kb upstream 3573 true chr4: 16577570-16581142 Medicago truncatula
Medtr4g046757 0.5kb upstream 0.5kb upstream 500 false chr4: 16577570-16578069 Medicago truncatula
Medtr4g046757 0.5kb downstream 0.5kb downstream 3573 true chr4: 16578070-16581642 Medicago truncatula
Medtr4g046757 0.5kb downstream 0.5kb downstream 500 false chr4: 16581143-16581642 Medicago truncatula
Medtr4g046757 1.0kb upstream 1.0kb upstream 4073 true chr4: 16577070-16581142 Medicago truncatula
Medtr4g046757 1.0kb upstream 1.0kb upstream 1000 false chr4: 16577070-16578069 Medicago truncatula
Medtr4g046757 1.0kb downstream 1.0kb downstream 4073 true chr4: 16578070-16582142 Medicago truncatula
Medtr4g046757 1.0kb downstream 1.0kb downstream 1000 false chr4: 16581143-16582142 Medicago truncatula
Medtr4g046757 2.0kb upstream 2.0kb upstream 5073 true chr4: 16576070-16581142 Medicago truncatula
Medtr4g046757 2.0kb upstream 2.0kb upstream 2000 false chr4: 16576070-16578069 Medicago truncatula
Medtr4g046757 2.0kb downstream 2.0kb downstream 5073 true chr4: 16578070-16583142 Medicago truncatula
Medtr4g046757 2.0kb downstream 2.0kb downstream 2000 false chr4: 16581143-16583142 Medicago truncatula
Medtr4g046757 5.0kb upstream 5.0kb upstream 8073 true chr4: 16573070-16581142 Medicago truncatula
Medtr4g046757 5.0kb upstream 5.0kb upstream 5000 false chr4: 16573070-16578069 Medicago truncatula
Medtr4g046757 5.0kb downstream 5.0kb downstream 8073 true chr4: 16578070-16586142 Medicago truncatula
Medtr4g046757 5.0kb downstream 5.0kb downstream 5000 false chr4: 16581143-16586142 Medicago truncatula
Medtr4g046757 10.0kb upstream 10.0kb upstream 13073 true chr4: 16568070-16581142 Medicago truncatula
Medtr4g046757 10.0kb upstream 10.0kb upstream 10000 false chr4: 16568070-16578069 Medicago truncatula
Medtr4g046757 10.0kb downstream 10.0kb downstream 13073 true chr4: 16578070-16591142 Medicago truncatula
Medtr4g046757 10.0kb downstream 10.0kb downstream 10000 false chr4: 16581143-16591142 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301201 5265 Fabidae View MSA
124069108 5270 Rosid View MSA
123740253 5271 Pentapetalae View MSA
122791392 5272 Eudicot View MSA
122049985 5273 Angiosperm View MSA
121347561 5274 Embryophyte View MSA
123428552 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain