Gene : Medtr4g039650 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21736:SF23 - PROTEIN OBERON 4 Description:  oberon-like protein
Genomic Order:  1762 Name:  ? Medtr4g039650
Secondary Identifier:  ? PAC:31106364
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g039650 0.5kb upstream 0.5kb upstream 6154 true chr4: 14080349-14086502 Medicago truncatula
Medtr4g039650 0.5kb upstream 0.5kb upstream 500 false chr4: 14080349-14080848 Medicago truncatula
Medtr4g039650 0.5kb downstream 0.5kb downstream 6154 true chr4: 14080849-14087002 Medicago truncatula
Medtr4g039650 0.5kb downstream 0.5kb downstream 500 false chr4: 14086503-14087002 Medicago truncatula
Medtr4g039650 1.0kb upstream 1.0kb upstream 6654 true chr4: 14079849-14086502 Medicago truncatula
Medtr4g039650 1.0kb upstream 1.0kb upstream 1000 false chr4: 14079849-14080848 Medicago truncatula
Medtr4g039650 1.0kb downstream 1.0kb downstream 6654 true chr4: 14080849-14087502 Medicago truncatula
Medtr4g039650 1.0kb downstream 1.0kb downstream 1000 false chr4: 14086503-14087502 Medicago truncatula
Medtr4g039650 2.0kb upstream 2.0kb upstream 7654 true chr4: 14078849-14086502 Medicago truncatula
Medtr4g039650 2.0kb upstream 2.0kb upstream 2000 false chr4: 14078849-14080848 Medicago truncatula
Medtr4g039650 2.0kb downstream 2.0kb downstream 7654 true chr4: 14080849-14088502 Medicago truncatula
Medtr4g039650 2.0kb downstream 2.0kb downstream 2000 false chr4: 14086503-14088502 Medicago truncatula
Medtr4g039650 5.0kb upstream 5.0kb upstream 10654 true chr4: 14075849-14086502 Medicago truncatula
Medtr4g039650 5.0kb upstream 5.0kb upstream 5000 false chr4: 14075849-14080848 Medicago truncatula
Medtr4g039650 5.0kb downstream 5.0kb downstream 10654 true chr4: 14080849-14091502 Medicago truncatula
Medtr4g039650 5.0kb downstream 5.0kb downstream 5000 false chr4: 14086503-14091502 Medicago truncatula
Medtr4g039650 10.0kb upstream 10.0kb upstream 15654 true chr4: 14070849-14086502 Medicago truncatula
Medtr4g039650 10.0kb upstream 10.0kb upstream 10000 false chr4: 14070849-14080848 Medicago truncatula
Medtr4g039650 10.0kb downstream 10.0kb downstream 15654 true chr4: 14080849-14096502 Medicago truncatula
Medtr4g039650 10.0kb downstream 10.0kb downstream 10000 false chr4: 14086503-14096502 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304566 5265 Fabidae View MSA
124068909 5270 Rosid View MSA
123740633 5271 Pentapetalae View MSA
122788431 5272 Eudicot View MSA
122042816 5273 Angiosperm View MSA
121350320 5274 Embryophyte View MSA
123381677 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.95     High High
cufflinks 18.185     High  
cufflinks 24.397     High  
cufflinks 7.881       Low
cufflinks 18.769     High  
cufflinks 6.843       Low
cufflinks 16.599     High  
cufflinks 20.188     High  
cufflinks 11.588     High  

0 Strain