Gene : Medtr4g037305 M. truncatula Mt4.0v1
Defline:  (1 of 5) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase Description:  3-methyl-2-oxobutanoate hydroxymethyltransferase
Genomic Order:  1721 Name:  ? Medtr4g037305
Secondary Identifier:  ? PAC:31113300
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PANTO-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g037305 0.5kb upstream 0.5kb upstream 6335 true chr4: 13744142-13750476 Medicago truncatula
Medtr4g037305 0.5kb upstream 0.5kb upstream 500 false chr4: 13749977-13750476 Medicago truncatula
Medtr4g037305 0.5kb downstream 0.5kb downstream 6335 true chr4: 13743642-13749976 Medicago truncatula
Medtr4g037305 0.5kb downstream 0.5kb downstream 500 false chr4: 13743642-13744141 Medicago truncatula
Medtr4g037305 1.0kb upstream 1.0kb upstream 6835 true chr4: 13744142-13750976 Medicago truncatula
Medtr4g037305 1.0kb upstream 1.0kb upstream 1000 false chr4: 13749977-13750976 Medicago truncatula
Medtr4g037305 1.0kb downstream 1.0kb downstream 6835 true chr4: 13743142-13749976 Medicago truncatula
Medtr4g037305 1.0kb downstream 1.0kb downstream 1000 false chr4: 13743142-13744141 Medicago truncatula
Medtr4g037305 2.0kb upstream 2.0kb upstream 7835 true chr4: 13744142-13751976 Medicago truncatula
Medtr4g037305 2.0kb upstream 2.0kb upstream 2000 false chr4: 13749977-13751976 Medicago truncatula
Medtr4g037305 2.0kb downstream 2.0kb downstream 7835 true chr4: 13742142-13749976 Medicago truncatula
Medtr4g037305 2.0kb downstream 2.0kb downstream 2000 false chr4: 13742142-13744141 Medicago truncatula
Medtr4g037305 5.0kb upstream 5.0kb upstream 10835 true chr4: 13744142-13754976 Medicago truncatula
Medtr4g037305 5.0kb upstream 5.0kb upstream 5000 false chr4: 13749977-13754976 Medicago truncatula
Medtr4g037305 5.0kb downstream 5.0kb downstream 10835 true chr4: 13739142-13749976 Medicago truncatula
Medtr4g037305 5.0kb downstream 5.0kb downstream 5000 false chr4: 13739142-13744141 Medicago truncatula
Medtr4g037305 10.0kb upstream 10.0kb upstream 15835 true chr4: 13744142-13759976 Medicago truncatula
Medtr4g037305 10.0kb upstream 10.0kb upstream 10000 false chr4: 13749977-13759976 Medicago truncatula
Medtr4g037305 10.0kb downstream 10.0kb downstream 15835 true chr4: 13734142-13749976 Medicago truncatula
Medtr4g037305 10.0kb downstream 10.0kb downstream 10000 false chr4: 13734142-13744141 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298858 5265 Fabidae View MSA
124040119 5270 Rosid View MSA
123611689 5271 Pentapetalae View MSA
122646239 5272 Eudicot View MSA
122047605 5273 Angiosperm View MSA
121346037 5274 Embryophyte View MSA
123424122 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.379        
cufflinks 0.388        
cufflinks 0.467       High
cufflinks 0.15       Low
cufflinks 0.514       High
cufflinks 0.189       Low
cufflinks 0.251        
cufflinks 0.382        
cufflinks 0.195        

0 Strain