Gene : Medtr4g011810 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23074:SF19 - KATANIN P60 ATPASE-CONTAINING SUBUNIT A1 Description:  katanin p60 ATPase subunit-like protein
Genomic Order:  407 Name:  ? Medtr4g011810
Secondary Identifier:  ? PAC:31108689
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g011810 0.5kb upstream 0.5kb upstream 5001 true chr4: 2987259-2992259 Medicago truncatula
Medtr4g011810 0.5kb upstream 0.5kb upstream 500 false chr4: 2991760-2992259 Medicago truncatula
Medtr4g011810 0.5kb downstream 0.5kb downstream 5001 true chr4: 2986759-2991759 Medicago truncatula
Medtr4g011810 0.5kb downstream 0.5kb downstream 500 false chr4: 2986759-2987258 Medicago truncatula
Medtr4g011810 1.0kb upstream 1.0kb upstream 5501 true chr4: 2987259-2992759 Medicago truncatula
Medtr4g011810 1.0kb upstream 1.0kb upstream 1000 false chr4: 2991760-2992759 Medicago truncatula
Medtr4g011810 1.0kb downstream 1.0kb downstream 5501 true chr4: 2986259-2991759 Medicago truncatula
Medtr4g011810 1.0kb downstream 1.0kb downstream 1000 false chr4: 2986259-2987258 Medicago truncatula
Medtr4g011810 2.0kb upstream 2.0kb upstream 6501 true chr4: 2987259-2993759 Medicago truncatula
Medtr4g011810 2.0kb upstream 2.0kb upstream 2000 false chr4: 2991760-2993759 Medicago truncatula
Medtr4g011810 2.0kb downstream 2.0kb downstream 6501 true chr4: 2985259-2991759 Medicago truncatula
Medtr4g011810 2.0kb downstream 2.0kb downstream 2000 false chr4: 2985259-2987258 Medicago truncatula
Medtr4g011810 5.0kb upstream 5.0kb upstream 9501 true chr4: 2987259-2996759 Medicago truncatula
Medtr4g011810 5.0kb upstream 5.0kb upstream 5000 false chr4: 2991760-2996759 Medicago truncatula
Medtr4g011810 5.0kb downstream 5.0kb downstream 9501 true chr4: 2982259-2991759 Medicago truncatula
Medtr4g011810 5.0kb downstream 5.0kb downstream 5000 false chr4: 2982259-2987258 Medicago truncatula
Medtr4g011810 10.0kb upstream 10.0kb upstream 14501 true chr4: 2987259-3001759 Medicago truncatula
Medtr4g011810 10.0kb upstream 10.0kb upstream 10000 false chr4: 2991760-3001759 Medicago truncatula
Medtr4g011810 10.0kb downstream 10.0kb downstream 14501 true chr4: 2977259-2991759 Medicago truncatula
Medtr4g011810 10.0kb downstream 10.0kb downstream 10000 false chr4: 2977259-2987258 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300026 5265 Fabidae View MSA
124065389 5270 Rosid View MSA
123736381 5271 Pentapetalae View MSA
122791135 5272 Eudicot View MSA
122044987 5273 Angiosperm View MSA
121345525 5274 Embryophyte View MSA
123426944 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.53        
cufflinks 2.315        
cufflinks 1.882        
cufflinks 3.593       High
cufflinks 2.414        
cufflinks 1.106       Low
cufflinks 2.339        
cufflinks 1.88        
cufflinks 3.756       High

0 Strain