Gene : Medtr4g006320 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR23115:SF186 - EUKARYOTIC TRANSLATION INITIATION FACTOR 5B Description:  translation initiation factor IF-2
Genomic Order:  77 Name:  ? Medtr4g006320
Secondary Identifier:  ? PAC:31111297
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g006320 0.5kb upstream 0.5kb upstream 4981 true chr4: 589815-594795 Medicago truncatula
Medtr4g006320 0.5kb upstream 0.5kb upstream 500 false chr4: 594296-594795 Medicago truncatula
Medtr4g006320 0.5kb downstream 0.5kb downstream 4981 true chr4: 589315-594295 Medicago truncatula
Medtr4g006320 0.5kb downstream 0.5kb downstream 500 false chr4: 589315-589814 Medicago truncatula
Medtr4g006320 1.0kb upstream 1.0kb upstream 5481 true chr4: 589815-595295 Medicago truncatula
Medtr4g006320 1.0kb upstream 1.0kb upstream 1000 false chr4: 594296-595295 Medicago truncatula
Medtr4g006320 1.0kb downstream 1.0kb downstream 5481 true chr4: 588815-594295 Medicago truncatula
Medtr4g006320 1.0kb downstream 1.0kb downstream 1000 false chr4: 588815-589814 Medicago truncatula
Medtr4g006320 2.0kb upstream 2.0kb upstream 6481 true chr4: 589815-596295 Medicago truncatula
Medtr4g006320 2.0kb upstream 2.0kb upstream 2000 false chr4: 594296-596295 Medicago truncatula
Medtr4g006320 2.0kb downstream 2.0kb downstream 6481 true chr4: 587815-594295 Medicago truncatula
Medtr4g006320 2.0kb downstream 2.0kb downstream 2000 false chr4: 587815-589814 Medicago truncatula
Medtr4g006320 5.0kb upstream 5.0kb upstream 9481 true chr4: 589815-599295 Medicago truncatula
Medtr4g006320 5.0kb upstream 5.0kb upstream 5000 false chr4: 594296-599295 Medicago truncatula
Medtr4g006320 5.0kb downstream 5.0kb downstream 9481 true chr4: 584815-594295 Medicago truncatula
Medtr4g006320 5.0kb downstream 5.0kb downstream 5000 false chr4: 584815-589814 Medicago truncatula
Medtr4g006320 10.0kb upstream 10.0kb upstream 14481 true chr4: 589815-604295 Medicago truncatula
Medtr4g006320 10.0kb upstream 10.0kb upstream 10000 false chr4: 594296-604295 Medicago truncatula
Medtr4g006320 10.0kb downstream 10.0kb downstream 14481 true chr4: 579815-594295 Medicago truncatula
Medtr4g006320 10.0kb downstream 10.0kb downstream 10000 false chr4: 579815-589814 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298609 5265 Fabidae View MSA
124037984 5270 Rosid View MSA
123610596 5271 Pentapetalae View MSA
122645204 5272 Eudicot View MSA
122051139 5273 Angiosperm View MSA
121347361 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low  
cufflinks 3.692        
cufflinks 4.915        
cufflinks 0.021     Low  
cufflinks 5.305        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 3.871        
cufflinks 0.07     Low  

0 Strain