Gene : Medtr3g110240 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11909:SF73 - PROTEIN KINASE FAMILY PROTEIN Description:  casein kinase I-like protein
Genomic Order:  6222 Name:  ? Medtr3g110240
Secondary Identifier:  ? PAC:31059126
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g110240 0.5kb upstream 0.5kb upstream 5300 true chr3: 51437362-51442661 Medicago truncatula
Medtr3g110240 0.5kb upstream 0.5kb upstream 500 false chr3: 51437362-51437861 Medicago truncatula
Medtr3g110240 0.5kb downstream 0.5kb downstream 5300 true chr3: 51437862-51443161 Medicago truncatula
Medtr3g110240 0.5kb downstream 0.5kb downstream 500 false chr3: 51442662-51443161 Medicago truncatula
Medtr3g110240 1.0kb upstream 1.0kb upstream 5800 true chr3: 51436862-51442661 Medicago truncatula
Medtr3g110240 1.0kb upstream 1.0kb upstream 1000 false chr3: 51436862-51437861 Medicago truncatula
Medtr3g110240 1.0kb downstream 1.0kb downstream 5800 true chr3: 51437862-51443661 Medicago truncatula
Medtr3g110240 1.0kb downstream 1.0kb downstream 1000 false chr3: 51442662-51443661 Medicago truncatula
Medtr3g110240 2.0kb upstream 2.0kb upstream 6800 true chr3: 51435862-51442661 Medicago truncatula
Medtr3g110240 2.0kb upstream 2.0kb upstream 2000 false chr3: 51435862-51437861 Medicago truncatula
Medtr3g110240 2.0kb downstream 2.0kb downstream 6800 true chr3: 51437862-51444661 Medicago truncatula
Medtr3g110240 2.0kb downstream 2.0kb downstream 2000 false chr3: 51442662-51444661 Medicago truncatula
Medtr3g110240 5.0kb upstream 5.0kb upstream 9800 true chr3: 51432862-51442661 Medicago truncatula
Medtr3g110240 5.0kb upstream 5.0kb upstream 5000 false chr3: 51432862-51437861 Medicago truncatula
Medtr3g110240 5.0kb downstream 5.0kb downstream 9800 true chr3: 51437862-51447661 Medicago truncatula
Medtr3g110240 5.0kb downstream 5.0kb downstream 5000 false chr3: 51442662-51447661 Medicago truncatula
Medtr3g110240 10.0kb upstream 10.0kb upstream 14800 true chr3: 51427862-51442661 Medicago truncatula
Medtr3g110240 10.0kb upstream 10.0kb upstream 10000 false chr3: 51427862-51437861 Medicago truncatula
Medtr3g110240 10.0kb downstream 10.0kb downstream 14800 true chr3: 51437862-51452661 Medicago truncatula
Medtr3g110240 10.0kb downstream 10.0kb downstream 10000 false chr3: 51442662-51452661 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311883 5265 Fabidae View MSA
124069756 5270 Rosid View MSA
123746261 5271 Pentapetalae View MSA
122793480 5272 Eudicot View MSA
122042474 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.563       High
cufflinks 1.005        
cufflinks 0.818        
cufflinks 0.599        
cufflinks 1.62       High
cufflinks 0.405       Low
cufflinks 1.156        
cufflinks 0.67        
cufflinks 1.392        

0 Strain