Gene : Medtr3g115640 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11216:SF72 - CALCIUM-BINDING EF HAND-CONTAINING PROTEIN Description:  calcium-binding EF hand protein
Genomic Order:  6555 Name:  ? Medtr3g115640
Secondary Identifier:  ? PAC:31058000
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g115640 0.5kb upstream 0.5kb upstream 11923 true chr3: 54122592-54134514 Medicago truncatula
Medtr3g115640 0.5kb upstream 0.5kb upstream 500 false chr3: 54122592-54123091 Medicago truncatula
Medtr3g115640 0.5kb downstream 0.5kb downstream 11923 true chr3: 54123092-54135014 Medicago truncatula
Medtr3g115640 0.5kb downstream 0.5kb downstream 500 false chr3: 54134515-54135014 Medicago truncatula
Medtr3g115640 1.0kb upstream 1.0kb upstream 12423 true chr3: 54122092-54134514 Medicago truncatula
Medtr3g115640 1.0kb upstream 1.0kb upstream 1000 false chr3: 54122092-54123091 Medicago truncatula
Medtr3g115640 1.0kb downstream 1.0kb downstream 12423 true chr3: 54123092-54135514 Medicago truncatula
Medtr3g115640 1.0kb downstream 1.0kb downstream 1000 false chr3: 54134515-54135514 Medicago truncatula
Medtr3g115640 2.0kb upstream 2.0kb upstream 13423 true chr3: 54121092-54134514 Medicago truncatula
Medtr3g115640 2.0kb upstream 2.0kb upstream 2000 false chr3: 54121092-54123091 Medicago truncatula
Medtr3g115640 2.0kb downstream 2.0kb downstream 13423 true chr3: 54123092-54136514 Medicago truncatula
Medtr3g115640 2.0kb downstream 2.0kb downstream 2000 false chr3: 54134515-54136514 Medicago truncatula
Medtr3g115640 5.0kb upstream 5.0kb upstream 16423 true chr3: 54118092-54134514 Medicago truncatula
Medtr3g115640 5.0kb upstream 5.0kb upstream 5000 false chr3: 54118092-54123091 Medicago truncatula
Medtr3g115640 5.0kb downstream 5.0kb downstream 16423 true chr3: 54123092-54139514 Medicago truncatula
Medtr3g115640 5.0kb downstream 5.0kb downstream 5000 false chr3: 54134515-54139514 Medicago truncatula
Medtr3g115640 10.0kb upstream 10.0kb upstream 21423 true chr3: 54113092-54134514 Medicago truncatula
Medtr3g115640 10.0kb upstream 10.0kb upstream 10000 false chr3: 54113092-54123091 Medicago truncatula
Medtr3g115640 10.0kb downstream 10.0kb downstream 21423 true chr3: 54123092-54144514 Medicago truncatula
Medtr3g115640 10.0kb downstream 10.0kb downstream 10000 false chr3: 54134515-54144514 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303982 5265 Fabidae View MSA
124065520 5270 Rosid View MSA
123746825 5271 Pentapetalae View MSA
122791981 5272 Eudicot View MSA
122047031 5273 Angiosperm View MSA
121346987 5274 Embryophyte View MSA
123426341 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.255        
cufflinks 8.287        
cufflinks 9.153        
cufflinks 4.649       Low
cufflinks 9.166        
cufflinks 3.144       Low
cufflinks 6.261        
cufflinks 8.003        
cufflinks 6.411        

0 Strain