Gene : Medtr3g075180 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12741:SF5 - CALLOSE SYNTHASE 10 Description:  callose synthase-like protein
Genomic Order:  3819 Name:  ? Medtr3g075180
Secondary Identifier:  ? PAC:31058188
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6773 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g075180 0.5kb upstream 0.5kb upstream 36459 true chr3: 34165123-34201581 Medicago truncatula
Medtr3g075180 0.5kb upstream 0.5kb upstream 500 false chr3: 34165123-34165622 Medicago truncatula
Medtr3g075180 0.5kb downstream 0.5kb downstream 36459 true chr3: 34165623-34202081 Medicago truncatula
Medtr3g075180 0.5kb downstream 0.5kb downstream 500 false chr3: 34201582-34202081 Medicago truncatula
Medtr3g075180 1.0kb upstream 1.0kb upstream 36959 true chr3: 34164623-34201581 Medicago truncatula
Medtr3g075180 1.0kb upstream 1.0kb upstream 1000 false chr3: 34164623-34165622 Medicago truncatula
Medtr3g075180 1.0kb downstream 1.0kb downstream 36959 true chr3: 34165623-34202581 Medicago truncatula
Medtr3g075180 1.0kb downstream 1.0kb downstream 1000 false chr3: 34201582-34202581 Medicago truncatula
Medtr3g075180 2.0kb upstream 2.0kb upstream 37959 true chr3: 34163623-34201581 Medicago truncatula
Medtr3g075180 2.0kb upstream 2.0kb upstream 2000 false chr3: 34163623-34165622 Medicago truncatula
Medtr3g075180 2.0kb downstream 2.0kb downstream 37959 true chr3: 34165623-34203581 Medicago truncatula
Medtr3g075180 2.0kb downstream 2.0kb downstream 2000 false chr3: 34201582-34203581 Medicago truncatula
Medtr3g075180 5.0kb upstream 5.0kb upstream 40959 true chr3: 34160623-34201581 Medicago truncatula
Medtr3g075180 5.0kb upstream 5.0kb upstream 5000 false chr3: 34160623-34165622 Medicago truncatula
Medtr3g075180 5.0kb downstream 5.0kb downstream 40959 true chr3: 34165623-34206581 Medicago truncatula
Medtr3g075180 5.0kb downstream 5.0kb downstream 5000 false chr3: 34201582-34206581 Medicago truncatula
Medtr3g075180 10.0kb upstream 10.0kb upstream 45959 true chr3: 34155623-34201581 Medicago truncatula
Medtr3g075180 10.0kb upstream 10.0kb upstream 10000 false chr3: 34155623-34165622 Medicago truncatula
Medtr3g075180 10.0kb downstream 10.0kb downstream 45959 true chr3: 34165623-34211581 Medicago truncatula
Medtr3g075180 10.0kb downstream 10.0kb downstream 10000 false chr3: 34201582-34211581 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313418 5265 Fabidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.821        
cufflinks 1.248        
cufflinks 1.103        
cufflinks 0.336       Low
cufflinks 1.536       High
cufflinks 0.242       Low
cufflinks 0.66        
cufflinks 1.003        
cufflinks 0.547        

0 Strain