Gene : Medtr3g031040 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00204//PF00521//PF01751//PF02518//PF16898 - DNA gyrase B (DNA_gyraseB) // DNA gyrase/topoisomerase IV, subunit A (DNA_topoisoIV) // Toprim domain (Toprim) // Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) // C-terminal associated domain of TOPRIM (TOPRIM_C) Description:  DNA topoisomerase IV subunit A
Genomic Order:  1189 Name:  ? Medtr3g031040
Secondary Identifier:  ? PAC:31055738
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g031040 0.5kb upstream 0.5kb upstream 9228 true chr3: 9869222-9878449 Medicago truncatula
Medtr3g031040 0.5kb upstream 0.5kb upstream 500 false chr3: 9877950-9878449 Medicago truncatula
Medtr3g031040 0.5kb downstream 0.5kb downstream 9228 true chr3: 9868722-9877949 Medicago truncatula
Medtr3g031040 0.5kb downstream 0.5kb downstream 500 false chr3: 9868722-9869221 Medicago truncatula
Medtr3g031040 1.0kb upstream 1.0kb upstream 9728 true chr3: 9869222-9878949 Medicago truncatula
Medtr3g031040 1.0kb upstream 1.0kb upstream 1000 false chr3: 9877950-9878949 Medicago truncatula
Medtr3g031040 1.0kb downstream 1.0kb downstream 9728 true chr3: 9868222-9877949 Medicago truncatula
Medtr3g031040 1.0kb downstream 1.0kb downstream 1000 false chr3: 9868222-9869221 Medicago truncatula
Medtr3g031040 2.0kb upstream 2.0kb upstream 10728 true chr3: 9869222-9879949 Medicago truncatula
Medtr3g031040 2.0kb upstream 2.0kb upstream 2000 false chr3: 9877950-9879949 Medicago truncatula
Medtr3g031040 2.0kb downstream 2.0kb downstream 10728 true chr3: 9867222-9877949 Medicago truncatula
Medtr3g031040 2.0kb downstream 2.0kb downstream 2000 false chr3: 9867222-9869221 Medicago truncatula
Medtr3g031040 5.0kb upstream 5.0kb upstream 13728 true chr3: 9869222-9882949 Medicago truncatula
Medtr3g031040 5.0kb upstream 5.0kb upstream 5000 false chr3: 9877950-9882949 Medicago truncatula
Medtr3g031040 5.0kb downstream 5.0kb downstream 13728 true chr3: 9864222-9877949 Medicago truncatula
Medtr3g031040 5.0kb downstream 5.0kb downstream 5000 false chr3: 9864222-9869221 Medicago truncatula
Medtr3g031040 10.0kb upstream 10.0kb upstream 18728 true chr3: 9869222-9887949 Medicago truncatula
Medtr3g031040 10.0kb upstream 10.0kb upstream 10000 false chr3: 9877950-9887949 Medicago truncatula
Medtr3g031040 10.0kb downstream 10.0kb downstream 18728 true chr3: 9859222-9877949 Medicago truncatula
Medtr3g031040 10.0kb downstream 10.0kb downstream 10000 false chr3: 9859222-9869221 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299523 5265 Fabidae View MSA
124064018 5270 Rosid View MSA
123736481 5271 Pentapetalae View MSA
122791740 5272 Eudicot View MSA
122046291 5273 Angiosperm View MSA
121345151 5274 Embryophyte View MSA
123423865 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.016        
cufflinks 0.43        
cufflinks 0.35        
cufflinks 0.45        
cufflinks 0.305        
cufflinks 0.474        
cufflinks 2.664       High
cufflinks 0.572        
cufflinks 2.849       High

0 Strain