Gene : Medtr1g116470 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12741:SF12 - CALLOSE SYNTHASE 9 Description:  callose synthase-like protein
Genomic Order:  6665 Name:  ? Medtr1g116470
Secondary Identifier:  ? PAC:31097938
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6773 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g116470 0.5kb upstream 0.5kb upstream 42459 true chr1: 52643794-52686252 Medicago truncatula
Medtr1g116470 0.5kb upstream 0.5kb upstream 500 false chr1: 52643794-52644293 Medicago truncatula
Medtr1g116470 0.5kb downstream 0.5kb downstream 42459 true chr1: 52644294-52686752 Medicago truncatula
Medtr1g116470 0.5kb downstream 0.5kb downstream 500 false chr1: 52686253-52686752 Medicago truncatula
Medtr1g116470 1.0kb upstream 1.0kb upstream 42959 true chr1: 52643294-52686252 Medicago truncatula
Medtr1g116470 1.0kb upstream 1.0kb upstream 1000 false chr1: 52643294-52644293 Medicago truncatula
Medtr1g116470 1.0kb downstream 1.0kb downstream 42959 true chr1: 52644294-52687252 Medicago truncatula
Medtr1g116470 1.0kb downstream 1.0kb downstream 1000 false chr1: 52686253-52687252 Medicago truncatula
Medtr1g116470 2.0kb upstream 2.0kb upstream 43959 true chr1: 52642294-52686252 Medicago truncatula
Medtr1g116470 2.0kb upstream 2.0kb upstream 2000 false chr1: 52642294-52644293 Medicago truncatula
Medtr1g116470 2.0kb downstream 2.0kb downstream 43959 true chr1: 52644294-52688252 Medicago truncatula
Medtr1g116470 2.0kb downstream 2.0kb downstream 2000 false chr1: 52686253-52688252 Medicago truncatula
Medtr1g116470 5.0kb upstream 5.0kb upstream 46959 true chr1: 52639294-52686252 Medicago truncatula
Medtr1g116470 5.0kb upstream 5.0kb upstream 5000 false chr1: 52639294-52644293 Medicago truncatula
Medtr1g116470 5.0kb downstream 5.0kb downstream 46959 true chr1: 52644294-52691252 Medicago truncatula
Medtr1g116470 5.0kb downstream 5.0kb downstream 5000 false chr1: 52686253-52691252 Medicago truncatula
Medtr1g116470 10.0kb upstream 10.0kb upstream 51959 true chr1: 52634294-52686252 Medicago truncatula
Medtr1g116470 10.0kb upstream 10.0kb upstream 10000 false chr1: 52634294-52644293 Medicago truncatula
Medtr1g116470 10.0kb downstream 10.0kb downstream 51959 true chr1: 52644294-52696252 Medicago truncatula
Medtr1g116470 10.0kb downstream 10.0kb downstream 10000 false chr1: 52686253-52696252 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303104 5265 Fabidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.006        
cufflinks 1.153        
cufflinks 0.839        
cufflinks 0.222       Low
cufflinks 1.114        
cufflinks 0.299       Low
cufflinks 0.661        
cufflinks 0.841        
cufflinks 0.546        

0 Strain