Gene : Medtr2g005740 M. truncatula Mt4.0v1
Description:  transmembrane protein, putative Genomic Order:  35
Name:  ? Medtr2g005740 Secondary Identifier:  ? PAC:31063258
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr2g005740 0.5kb upstream 0.5kb upstream 1612 true chr2: 292533-294144 Medicago truncatula
Medtr2g005740 0.5kb upstream 0.5kb upstream 500 false chr2: 293645-294144 Medicago truncatula
Medtr2g005740 0.5kb downstream 0.5kb downstream 1612 true chr2: 292033-293644 Medicago truncatula
Medtr2g005740 0.5kb downstream 0.5kb downstream 500 false chr2: 292033-292532 Medicago truncatula
Medtr2g005740 1.0kb upstream 1.0kb upstream 2112 true chr2: 292533-294644 Medicago truncatula
Medtr2g005740 1.0kb upstream 1.0kb upstream 1000 false chr2: 293645-294644 Medicago truncatula
Medtr2g005740 1.0kb downstream 1.0kb downstream 2112 true chr2: 291533-293644 Medicago truncatula
Medtr2g005740 1.0kb downstream 1.0kb downstream 1000 false chr2: 291533-292532 Medicago truncatula
Medtr2g005740 2.0kb upstream 2.0kb upstream 3112 true chr2: 292533-295644 Medicago truncatula
Medtr2g005740 2.0kb upstream 2.0kb upstream 2000 false chr2: 293645-295644 Medicago truncatula
Medtr2g005740 2.0kb downstream 2.0kb downstream 3112 true chr2: 290533-293644 Medicago truncatula
Medtr2g005740 2.0kb downstream 2.0kb downstream 2000 false chr2: 290533-292532 Medicago truncatula
Medtr2g005740 5.0kb upstream 5.0kb upstream 6112 true chr2: 292533-298644 Medicago truncatula
Medtr2g005740 5.0kb upstream 5.0kb upstream 5000 false chr2: 293645-298644 Medicago truncatula
Medtr2g005740 5.0kb downstream 5.0kb downstream 6112 true chr2: 287533-293644 Medicago truncatula
Medtr2g005740 5.0kb downstream 5.0kb downstream 5000 false chr2: 287533-292532 Medicago truncatula
Medtr2g005740 10.0kb upstream 10.0kb upstream 11112 true chr2: 292533-303644 Medicago truncatula
Medtr2g005740 10.0kb upstream 10.0kb upstream 10000 false chr2: 293645-303644 Medicago truncatula
Medtr2g005740 10.0kb downstream 10.0kb downstream 11112 true chr2: 282533-293644 Medicago truncatula
Medtr2g005740 10.0kb downstream 10.0kb downstream 10000 false chr2: 282533-292532 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304872 5265 Fabidae View MSA
124063488 5270 Rosid View MSA
123741215 5271 Pentapetalae View MSA
122770018 5272 Eudicot View MSA
122050944 5273 Angiosperm View MSA
121312214 5274 Embryophyte View MSA
123349408 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.231       Low
cufflinks 0.586        
cufflinks 0.659        
cufflinks 0.236       Low
cufflinks 0.505        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.686        
cufflinks 0.707        
cufflinks 0.802        

0 Strain