Gene : Medtr1g116520 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR27001:SF115 - PTI1-LIKE TYROSINE-PROTEIN KINASE 1-RELATED Description:  Pti1-like kinase
Genomic Order:  6669 Name:  ? Medtr1g116520
Secondary Identifier:  ? PAC:31100324
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g116520 0.5kb upstream 0.5kb upstream 5369 true chr1: 52714746-52720114 Medicago truncatula
Medtr1g116520 0.5kb upstream 0.5kb upstream 500 false chr1: 52714746-52715245 Medicago truncatula
Medtr1g116520 0.5kb downstream 0.5kb downstream 5369 true chr1: 52715246-52720614 Medicago truncatula
Medtr1g116520 0.5kb downstream 0.5kb downstream 500 false chr1: 52720115-52720614 Medicago truncatula
Medtr1g116520 1.0kb upstream 1.0kb upstream 5869 true chr1: 52714246-52720114 Medicago truncatula
Medtr1g116520 1.0kb upstream 1.0kb upstream 1000 false chr1: 52714246-52715245 Medicago truncatula
Medtr1g116520 1.0kb downstream 1.0kb downstream 5869 true chr1: 52715246-52721114 Medicago truncatula
Medtr1g116520 1.0kb downstream 1.0kb downstream 1000 false chr1: 52720115-52721114 Medicago truncatula
Medtr1g116520 2.0kb upstream 2.0kb upstream 6869 true chr1: 52713246-52720114 Medicago truncatula
Medtr1g116520 2.0kb upstream 2.0kb upstream 2000 false chr1: 52713246-52715245 Medicago truncatula
Medtr1g116520 2.0kb downstream 2.0kb downstream 6869 true chr1: 52715246-52722114 Medicago truncatula
Medtr1g116520 2.0kb downstream 2.0kb downstream 2000 false chr1: 52720115-52722114 Medicago truncatula
Medtr1g116520 5.0kb upstream 5.0kb upstream 9869 true chr1: 52710246-52720114 Medicago truncatula
Medtr1g116520 5.0kb upstream 5.0kb upstream 5000 false chr1: 52710246-52715245 Medicago truncatula
Medtr1g116520 5.0kb downstream 5.0kb downstream 9869 true chr1: 52715246-52725114 Medicago truncatula
Medtr1g116520 5.0kb downstream 5.0kb downstream 5000 false chr1: 52720115-52725114 Medicago truncatula
Medtr1g116520 10.0kb upstream 10.0kb upstream 14869 true chr1: 52705246-52720114 Medicago truncatula
Medtr1g116520 10.0kb upstream 10.0kb upstream 10000 false chr1: 52705246-52715245 Medicago truncatula
Medtr1g116520 10.0kb downstream 10.0kb downstream 14869 true chr1: 52715246-52730114 Medicago truncatula
Medtr1g116520 10.0kb downstream 10.0kb downstream 10000 false chr1: 52720115-52730114 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313227 5265 Fabidae View MSA
124060437 5270 Rosid View MSA
123746986 5271 Pentapetalae View MSA
122791632 5272 Eudicot View MSA
122044012 5273 Angiosperm View MSA
121347180 5274 Embryophyte View MSA
123380505 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.818       Low
cufflinks 7.117        
cufflinks 9.603        
cufflinks 10.946     High High
cufflinks 5.777       Low
cufflinks 6.858        
cufflinks 8.744        
cufflinks 8.319        
cufflinks 11.256     High High

0 Strain