Gene : Medtr1g108690 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23030 - PCD6 INTERACTING PROTEIN-RELATED Description:  ALG2-interacting protein X
Genomic Order:  6182 Name:  ? Medtr1g108690
Secondary Identifier:  ? PAC:31097418
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g108690 0.5kb upstream 0.5kb upstream 13536 true chr1: 49113840-49127375 Medicago truncatula
Medtr1g108690 0.5kb upstream 0.5kb upstream 500 false chr1: 49126876-49127375 Medicago truncatula
Medtr1g108690 0.5kb downstream 0.5kb downstream 13536 true chr1: 49113340-49126875 Medicago truncatula
Medtr1g108690 0.5kb downstream 0.5kb downstream 500 false chr1: 49113340-49113839 Medicago truncatula
Medtr1g108690 1.0kb upstream 1.0kb upstream 14036 true chr1: 49113840-49127875 Medicago truncatula
Medtr1g108690 1.0kb upstream 1.0kb upstream 1000 false chr1: 49126876-49127875 Medicago truncatula
Medtr1g108690 1.0kb downstream 1.0kb downstream 14036 true chr1: 49112840-49126875 Medicago truncatula
Medtr1g108690 1.0kb downstream 1.0kb downstream 1000 false chr1: 49112840-49113839 Medicago truncatula
Medtr1g108690 2.0kb upstream 2.0kb upstream 15036 true chr1: 49113840-49128875 Medicago truncatula
Medtr1g108690 2.0kb upstream 2.0kb upstream 2000 false chr1: 49126876-49128875 Medicago truncatula
Medtr1g108690 2.0kb downstream 2.0kb downstream 15036 true chr1: 49111840-49126875 Medicago truncatula
Medtr1g108690 2.0kb downstream 2.0kb downstream 2000 false chr1: 49111840-49113839 Medicago truncatula
Medtr1g108690 5.0kb upstream 5.0kb upstream 18036 true chr1: 49113840-49131875 Medicago truncatula
Medtr1g108690 5.0kb upstream 5.0kb upstream 5000 false chr1: 49126876-49131875 Medicago truncatula
Medtr1g108690 5.0kb downstream 5.0kb downstream 18036 true chr1: 49108840-49126875 Medicago truncatula
Medtr1g108690 5.0kb downstream 5.0kb downstream 5000 false chr1: 49108840-49113839 Medicago truncatula
Medtr1g108690 10.0kb upstream 10.0kb upstream 23036 true chr1: 49113840-49136875 Medicago truncatula
Medtr1g108690 10.0kb upstream 10.0kb upstream 10000 false chr1: 49126876-49136875 Medicago truncatula
Medtr1g108690 10.0kb downstream 10.0kb downstream 23036 true chr1: 49103840-49126875 Medicago truncatula
Medtr1g108690 10.0kb downstream 10.0kb downstream 10000 false chr1: 49103840-49113839 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302215 5265 Fabidae View MSA
124061486 5270 Rosid View MSA
123737525 5271 Pentapetalae View MSA
122791394 5272 Eudicot View MSA
122048022 5273 Angiosperm View MSA
121345156 5274 Embryophyte View MSA
123423848 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.757        
cufflinks 5.47        
cufflinks 4.409        
cufflinks 5.136        
cufflinks 4.572        
cufflinks 2.939       Low
cufflinks 7.496       High
cufflinks 4.278        
cufflinks 9.112       High

0 Strain