Gene : Medtr1g106855 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13832:SF362 - PROTEIN PHOSPHATASE 2C 63-RELATED Description:  protein phosphatase 2C family protein
Genomic Order:  6072 Name:  ? Medtr1g106855
Secondary Identifier:  ? PAC:31099828
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g106855 0.5kb upstream 0.5kb upstream 3436 true chr1: 48355584-48359019 Medicago truncatula
Medtr1g106855 0.5kb upstream 0.5kb upstream 500 false chr1: 48355584-48356083 Medicago truncatula
Medtr1g106855 0.5kb downstream 0.5kb downstream 3436 true chr1: 48356084-48359519 Medicago truncatula
Medtr1g106855 0.5kb downstream 0.5kb downstream 500 false chr1: 48359020-48359519 Medicago truncatula
Medtr1g106855 1.0kb upstream 1.0kb upstream 3936 true chr1: 48355084-48359019 Medicago truncatula
Medtr1g106855 1.0kb upstream 1.0kb upstream 1000 false chr1: 48355084-48356083 Medicago truncatula
Medtr1g106855 1.0kb downstream 1.0kb downstream 3936 true chr1: 48356084-48360019 Medicago truncatula
Medtr1g106855 1.0kb downstream 1.0kb downstream 1000 false chr1: 48359020-48360019 Medicago truncatula
Medtr1g106855 2.0kb upstream 2.0kb upstream 4936 true chr1: 48354084-48359019 Medicago truncatula
Medtr1g106855 2.0kb upstream 2.0kb upstream 2000 false chr1: 48354084-48356083 Medicago truncatula
Medtr1g106855 2.0kb downstream 2.0kb downstream 4936 true chr1: 48356084-48361019 Medicago truncatula
Medtr1g106855 2.0kb downstream 2.0kb downstream 2000 false chr1: 48359020-48361019 Medicago truncatula
Medtr1g106855 5.0kb upstream 5.0kb upstream 7936 true chr1: 48351084-48359019 Medicago truncatula
Medtr1g106855 5.0kb upstream 5.0kb upstream 5000 false chr1: 48351084-48356083 Medicago truncatula
Medtr1g106855 5.0kb downstream 5.0kb downstream 7936 true chr1: 48356084-48364019 Medicago truncatula
Medtr1g106855 5.0kb downstream 5.0kb downstream 5000 false chr1: 48359020-48364019 Medicago truncatula
Medtr1g106855 10.0kb upstream 10.0kb upstream 12936 true chr1: 48346084-48359019 Medicago truncatula
Medtr1g106855 10.0kb upstream 10.0kb upstream 10000 false chr1: 48346084-48356083 Medicago truncatula
Medtr1g106855 10.0kb downstream 10.0kb downstream 12936 true chr1: 48356084-48369019 Medicago truncatula
Medtr1g106855 10.0kb downstream 10.0kb downstream 10000 false chr1: 48359020-48369019 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029851 5273 Angiosperm View MSA
122299468 5265 Fabidae View MSA
124066844 5270 Rosid View MSA
123747225 5271 Pentapetalae View MSA
122790095 5272 Eudicot View MSA
121299118 5274 Embryophyte View MSA
123337035 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.738     High  
cufflinks 5.621       Low
cufflinks 14.041     High  
cufflinks 14.894     High  
cufflinks 6.698       Low
cufflinks 21.874     High  
cufflinks 39.269     High High
cufflinks 6.238       Low
cufflinks 49.919     High High

0 Strain