Gene : Medtr1g072640 M. truncatula Mt4.0v1
Description:  PALE CRESS protein (PAC) Genomic Order:  3894
Name:  ? Medtr1g072640 Secondary Identifier:  ? PAC:31100679
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g072640 0.5kb upstream 0.5kb upstream 5376 true chr1: 32255395-32260770 Medicago truncatula
Medtr1g072640 0.5kb upstream 0.5kb upstream 500 false chr1: 32260271-32260770 Medicago truncatula
Medtr1g072640 0.5kb downstream 0.5kb downstream 5376 true chr1: 32254895-32260270 Medicago truncatula
Medtr1g072640 0.5kb downstream 0.5kb downstream 500 false chr1: 32254895-32255394 Medicago truncatula
Medtr1g072640 1.0kb upstream 1.0kb upstream 5876 true chr1: 32255395-32261270 Medicago truncatula
Medtr1g072640 1.0kb upstream 1.0kb upstream 1000 false chr1: 32260271-32261270 Medicago truncatula
Medtr1g072640 1.0kb downstream 1.0kb downstream 5876 true chr1: 32254395-32260270 Medicago truncatula
Medtr1g072640 1.0kb downstream 1.0kb downstream 1000 false chr1: 32254395-32255394 Medicago truncatula
Medtr1g072640 2.0kb upstream 2.0kb upstream 6876 true chr1: 32255395-32262270 Medicago truncatula
Medtr1g072640 2.0kb upstream 2.0kb upstream 2000 false chr1: 32260271-32262270 Medicago truncatula
Medtr1g072640 2.0kb downstream 2.0kb downstream 6876 true chr1: 32253395-32260270 Medicago truncatula
Medtr1g072640 2.0kb downstream 2.0kb downstream 2000 false chr1: 32253395-32255394 Medicago truncatula
Medtr1g072640 5.0kb upstream 5.0kb upstream 9876 true chr1: 32255395-32265270 Medicago truncatula
Medtr1g072640 5.0kb upstream 5.0kb upstream 5000 false chr1: 32260271-32265270 Medicago truncatula
Medtr1g072640 5.0kb downstream 5.0kb downstream 9876 true chr1: 32250395-32260270 Medicago truncatula
Medtr1g072640 5.0kb downstream 5.0kb downstream 5000 false chr1: 32250395-32255394 Medicago truncatula
Medtr1g072640 10.0kb upstream 10.0kb upstream 14876 true chr1: 32255395-32270270 Medicago truncatula
Medtr1g072640 10.0kb upstream 10.0kb upstream 10000 false chr1: 32260271-32270270 Medicago truncatula
Medtr1g072640 10.0kb downstream 10.0kb downstream 14876 true chr1: 32245395-32260270 Medicago truncatula
Medtr1g072640 10.0kb downstream 10.0kb downstream 10000 false chr1: 32245395-32255394 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300605 5265 Fabidae View MSA
124064228 5270 Rosid View MSA
123739203 5271 Pentapetalae View MSA
122787252 5272 Eudicot View MSA
122044872 5273 Angiosperm View MSA
121348914 5274 Embryophyte View MSA
123381076 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.749        
cufflinks 1.344        
cufflinks 2.184       High
cufflinks 0.323       Low
cufflinks 2.884       High
cufflinks 0.312       Low
cufflinks 0.55        
cufflinks 1.694        
cufflinks 0.348       Low

0 Strain