Gene : Medtr1g071400 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23083//PTHR23083:SF430 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR Description:  ethylene overproducer-like protein
Genomic Order:  3816 Name:  ? Medtr1g071400
Secondary Identifier:  ? PAC:31092608
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g071400 0.5kb upstream 0.5kb upstream 6000 true chr1: 31685554-31691553 Medicago truncatula
Medtr1g071400 0.5kb upstream 0.5kb upstream 500 false chr1: 31691054-31691553 Medicago truncatula
Medtr1g071400 0.5kb downstream 0.5kb downstream 6000 true chr1: 31685054-31691053 Medicago truncatula
Medtr1g071400 0.5kb downstream 0.5kb downstream 500 false chr1: 31685054-31685553 Medicago truncatula
Medtr1g071400 1.0kb upstream 1.0kb upstream 6500 true chr1: 31685554-31692053 Medicago truncatula
Medtr1g071400 1.0kb upstream 1.0kb upstream 1000 false chr1: 31691054-31692053 Medicago truncatula
Medtr1g071400 1.0kb downstream 1.0kb downstream 6500 true chr1: 31684554-31691053 Medicago truncatula
Medtr1g071400 1.0kb downstream 1.0kb downstream 1000 false chr1: 31684554-31685553 Medicago truncatula
Medtr1g071400 2.0kb upstream 2.0kb upstream 7500 true chr1: 31685554-31693053 Medicago truncatula
Medtr1g071400 2.0kb upstream 2.0kb upstream 2000 false chr1: 31691054-31693053 Medicago truncatula
Medtr1g071400 2.0kb downstream 2.0kb downstream 7500 true chr1: 31683554-31691053 Medicago truncatula
Medtr1g071400 2.0kb downstream 2.0kb downstream 2000 false chr1: 31683554-31685553 Medicago truncatula
Medtr1g071400 5.0kb upstream 5.0kb upstream 10500 true chr1: 31685554-31696053 Medicago truncatula
Medtr1g071400 5.0kb upstream 5.0kb upstream 5000 false chr1: 31691054-31696053 Medicago truncatula
Medtr1g071400 5.0kb downstream 5.0kb downstream 10500 true chr1: 31680554-31691053 Medicago truncatula
Medtr1g071400 5.0kb downstream 5.0kb downstream 5000 false chr1: 31680554-31685553 Medicago truncatula
Medtr1g071400 10.0kb upstream 10.0kb upstream 15500 true chr1: 31685554-31701053 Medicago truncatula
Medtr1g071400 10.0kb upstream 10.0kb upstream 10000 false chr1: 31691054-31701053 Medicago truncatula
Medtr1g071400 10.0kb downstream 10.0kb downstream 15500 true chr1: 31675554-31691053 Medicago truncatula
Medtr1g071400 10.0kb downstream 10.0kb downstream 10000 false chr1: 31675554-31685553 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311802 5265 Fabidae View MSA
124067211 5270 Rosid View MSA
123736449 5271 Pentapetalae View MSA
122791589 5272 Eudicot View MSA
122042735 5273 Angiosperm View MSA
121349439 5274 Embryophyte View MSA
123381312 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.171        
cufflinks 4.123        
cufflinks 3.483        
cufflinks 1.447       Low
cufflinks 4.924       High
cufflinks 0.786       Low
cufflinks 2.955        
cufflinks 3.36        
cufflinks 2.791        

0 Strain